RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 STX4Q12846 297 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 PDGFRLQ15198 375 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 TEX44Q53QW1 395 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 POLNQ7Z5Q5 900 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 CYP4Z2PQ8N1L4 340 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 KCTD4Q8WVF5 259 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 PSMG2Q969U7 264 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 CENPTQ96BT3 561 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 VPS4BO75351 444 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 LRIG2O94898 1065 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 POLD2P49005 469 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 ZFP28Q8NHY6 868 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 AARSD1Q9BTE6 412 aaKnown RBP13.52□□□□□ -0.24
RFFL-201ENST00000315249 ZDHHC4Q9NPG8 344 aa13.52□□□□□ -0.24
RFFL-201ENST00000315249 MYH3P11055 1940 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 YJEFN3A6XGL0 299 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 E7ENQ6 273 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 ANXA6P08133 673 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ITPKBP27987 946 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ZBTB17Q13105 803 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 IRF2BP2Q7Z5L9 587 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 TMC3Q7Z5M5 1100 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 PRSS58Q8IYP2 241 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ROGDIQ9GZN7 287 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 FZD8Q9H461 694 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 FAM83DQ9H4H8 585 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 POLR1BQ9H9Y6 1135 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 XPNPEP1Q9NQW7 623 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 MRPS33Q9Y291 106 aaKnown RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 WNT6Q9Y6F9 365 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ADAMTSL3P82987 1691 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 MYH9P35579 1960 aaKnown RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 MLYCDO95822 493 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 MYBL2P10244 700 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 SLC11A1P49279 550 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 IRAK1P51617 712 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ENPP7Q6UWV6 458 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 LDB1Q86U70 411 aaPredicted RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 CLEC4CQ8WTT0 213 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 TMEM175Q9BSA9 504 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 INSIG1O15503 277 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 FAM153BP0C7A2 387 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 NUP107P57740 925 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 FAM153CQ494X1 144 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 ZDHHC20Q5W0Z9 365 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 MACC1Q6ZN28 852 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 CELF5Q8N6W0 485 aaKnown RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 NSMCE2Q96MF7 247 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 BCO2Q9BYV7 579 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
RFFL-201ENST00000315249 FBXO5Q9UKT4 447 aa13.52□□□□□ -0.25
RFFL-201ENST00000315249 C5orf60A6NFR6 353 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 HSMCR30P0CW71 290 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 SSR2P43308 183 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 SEMA5AQ13591 1074 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 SIPA1Q96FS4 1042 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 ADPRHL2Q9NX46 363 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 MYH7P12883 1935 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 NR2F1P10589 423 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 RPS24P62847 133 aaKnown RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 ECT2LQ008S8 904 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 ZNF544Q6NX49 715 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 CHSY3Q70JA7 882 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 FGD2Q7Z6J4 655 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 SCUBE1Q8IWY4 988 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 MICU2Q8IYU8 434 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 JSRP1Q96MG2 331 aaPredicted RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 KRT8P05787 483 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 BLKP51451 505 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 YBEYP58557 167 aaPredicted RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 RALGDSQ12967 914 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 FAM98BQ52LJ0 330 aaKnown RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 RNF148Q8N7C7 305 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 BAP1Q92560 729 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 SUSD3Q96L08 255 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 MAGEH1Q9H213 219 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 NPEPPSL1A6NEC2 478 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 DCXO43602 365 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 NDST3O95803 873 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 CDK7P50613 346 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 DAOAP59103 153 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 ZNF786Q8N393 782 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 LCN9Q8WX39 176 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 DEPDC7Q96QD5 511 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 EBF3Q9H4W6 596 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 SGK2Q9HBY8 427 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 CROTQ9UKG9 612 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 KIAA0100Q14667 2235 aaKnown RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 KCNH1O95259 989 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 PRAMEF1O95521 474 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 MRPS15P82914 257 aaKnown RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 PHF19Q5T6S3 580 aa13.51□□□□□ -0.25
RFFL-201ENST00000315249 TTC33Q6PID6 262 aaPredicted RBP13.51□□□□□ -0.25
RFFL-201ENST00000315249 KYAT3Q6YP21 454 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms