RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.71□□□□□ -0.38
RETREG3-201ENST00000309428 J3KR12 359 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 DAB1O75553 588 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 GCATO75600 419 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 CNTN5O94779 1100 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 H6PDO95479 791 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 ASGR1P07306 291 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 CCDC166P0CW27 439 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 CDK4P11802 303 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 MYL4P12829 197 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 ZNF182P17025 639 aaPredicted RBP12.71□□□□□ -0.38
RETREG3-201ENST00000309428 UGT1A1P22309 533 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 UGT1A4P22310 534 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 UGT1A3P35503 534 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 UGT1A5P35504 534 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 NR2C2P49116 596 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 HTRA1Q92743 480 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 SMARCD1Q96GM5 515 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 PLAC1Q9HBJ0 212 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 MID1IP1Q9NPA3 183 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 PLK2Q9NYY3 685 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 ZDHHC2Q9UIJ5 367 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 FADS3Q9Y5Q0 445 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 PTGDR2Q9Y5Y4 395 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 RAD54BQ9Y620 910 aa12.71□□□□□ -0.38
RETREG3-201ENST00000309428 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SNX2O60749 519 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 MFN2O95140 757 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 KRT75O95678 551 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 KCNK10P57789 538 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 PRR23BQ6ZRT6 265 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 MILR1Q7Z6M3 343 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 ZMIZ2Q8NF64 920 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 FBXO30Q8TB52 745 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 MS4A4AQ96JQ5 239 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 GPATCH1Q9BRR8 931 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 C1orf50Q9BV19 199 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SLC39A8Q9C0K1 460 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 ABCB10Q9NRK6 738 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 HACD3Q9P035 362 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TMEM247A6NEH6 219 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 PIRO00625 290 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 PTPN9P43378 593 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SEPHS1P49903 392 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 UGP2Q16851 508 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 NAPEPLDQ6IQ20 393 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 ZNF598Q86UK7 904 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 FIG4Q92562 907 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 OSBPL11Q9BXB4 747 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 OSBPL6Q9BZF3 934 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SPAG4Q9NPE6 437 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TIMMDC1Q9NPL8 285 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 RAB26Q9ULW5 256 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 PHF24Q9UPV7 400 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 DHRS12A0PJE2 317 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 MTHFD1P11586 935 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 ODC1P11926 461 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TAS2R39P59534 338 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 IL5RAQ01344 420 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TWF1Q12792 350 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 ZNF235Q14590 738 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 PGS1Q32NB8 556 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TEX44Q53QW1 395 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SAMD4BQ5PRF9 694 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TMEM214Q6NUQ4 689 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 LINGO4Q6UY18 593 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 TMCO2Q7Z6W1 182 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 DACT3Q96B18 629 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 FBXL20Q96IG2 436 aa12.7□□□□□ -0.38
RETREG3-201ENST00000309428 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 PRPF19Q9UMS4 504 aaKnown RBP12.7□□□□□ -0.38
RETREG3-201ENST00000309428 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 C5orf42Q9H799 3197 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 LRRC14BA6NHZ5 514 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CAPN14A8MX76 684 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CCNT2O60583 730 aaKnown RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 F2P00734 622 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SNRPB2P08579 225 aaKnown RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 ARRB2P32121 409 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 AGMOQ6ZNB7 445 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 STRADAQ7RTN6 431 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CAMK1DQ8IU85 385 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 ARNTL2Q8WYA1 636 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 FBXO32Q969P5 355 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 HDAC10Q969S8 669 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 C12orf43Q96C57 262 aaKnown RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CEP19Q96LK0 163 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 MLPHQ9BV36 600 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 MARCH7Q9H992 704 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms