RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 LRIG2O94898 1065 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 GSNP06396 782 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 SLC1A2P43004 574 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 ST13P50502 369 aaKnown RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TRAP1Q12931 704 aaKnown RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 ZNF846Q147U1 533 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 PSMD5Q16401 504 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TWIST2Q8WVJ9 160 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 SLC29A1Q99808 456 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 COLEC11Q9BWP8 271 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 ALG2Q9H553 416 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 GIMAP2Q9UG22 337 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 RRN3P2A6NIE6 340 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 VILLO15195 856 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 CST1P01037 141 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 GRM5P41594 1212 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 PRKG2Q13237 762 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 CCNYL2Q5T2Q4 361 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 POC5Q8NA72 575 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 GAB3Q8WWW8 586 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TAMM41Q96BW9 452 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 KLHL32Q96NJ5 620 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 ITGB1BP2Q9UKP3 347 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 BBIP1A8MTZ0 92 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 NDST2P52849 883 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TUBA4AP68366 448 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TWF1Q12792 350 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TMEM126BQ8IUX1 230 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 CPSF7Q8N684 471 aaKnown RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TEKT5Q96M29 485 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 GPR22Q99680 433 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 DPY30Q9C005 99 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 REXO4Q9GZR2 422 aaKnown RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 MPP6Q9NZW5 540 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 IFT80Q9P2H3 777 aaPredicted RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 SH3PXD2BA1X283 911 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 PIP5K1BO14986 540 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 GUCA1CO95843 209 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 IDO1P14902 403 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 ZNF829Q3KNS6 432 aaPredicted RBP13.49□□□□□ -0.25
SEC23A-201ENST00000307712 THAP5Q7Z6K1 395 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 MILR1Q7Z6M3 343 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 LZTR1Q8N653 840 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 OR56A4Q8NGH8 313 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 STAG3L4Q8TBR4 150 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 TMEM174Q8WUU8 243 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 HTRA1Q92743 480 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 KLHL5Q96PQ7 755 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 HBEGFQ99075 208 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 CHID1Q9BWS9 393 aa13.49□□□□□ -0.25
SEC23A-201ENST00000307712 SDHDO14521 159 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 CES1P23141 567 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 IL4RP24394 825 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 RPL10P27635 214 aaKnown RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 EPHX2P34913 555 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ADCYAP1R1P41586 468 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 LHX1P48742 406 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 CACHD1Q5VU97 1274 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 CENPSQ8N2Z9 138 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ZFYVE19Q96K21 471 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ZNF512Q96ME7 567 aaPredicted RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 WWOXQ9NZC7 414 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 PNMA8BQ9ULN7 279 aaPredicted RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 TPRKBQ9Y3C4 175 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 CLDN25C9JDP6 229 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 SLC22A3O75751 556 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 EFEMP1Q12805 493 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 PDCD4Q53EL6 469 aaKnown RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 FAM35AQ86V20 835 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 PIGVQ9NUD9 493 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 SOWAHBA6NEL2 793 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 GPIP06744 558 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 THRBP10828 461 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ITGB6P18564 788 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 PCSK6P29122 969 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 PPP1R8Q12972 351 aaKnown RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 CCDC85BQ15834 202 aaPredicted RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 ARHGAP17Q68EM7 881 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 CCDC80Q76M96 950 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 TXNDC5Q8NBS9 432 aaKnown RBP13.48□□□□□ -0.25
SEC23A-201ENST00000307712 STYXQ8WUJ0 223 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 RTP4Q96DX8 246 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 USE1Q9NZ43 259 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 C3orf18Q9UK00 162 aa13.48□□□□□ -0.25
SEC23A-201ENST00000307712 LOC100506127A0A0U1RQW1 187 aa13.47□□□□□ -0.25
SEC23A-201ENST00000307712 A8MT66 165 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms