RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 C9orf57Q5W0N0 161 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 SMIM14Q96QK8 99 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 CXorf21Q9HAI6 301 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PRDM8Q9NQV8 689 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 CNOT6Q9ULM6 557 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 VPS4AQ9UN37 437 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 DMTF1Q9Y222 760 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PRG3Q9Y2Y8 225 aaPredicted RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 FBXO21O94952 628 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PGK1P00558 417 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 SMIM18P0DKX4 95 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PSMA4P25789 261 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 C21orf59P57076 290 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 TRIM25Q14258 630 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 ZNF423Q2M1K9 1284 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 FGD3Q5JSP0 725 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 OSTM1Q86WC4 334 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PGAM4Q8N0Y7 254 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 CATSPER1Q8NEC5 780 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 ITCHQ96J02 903 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 MLPHQ9BV36 600 aaPredicted RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 SP110Q9HB58 689 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 SPAG4Q9NPE6 437 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PTTG2Q9NZH5 202 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 TRAF6Q9Y4K3 522 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 A0A0J9YYE9 177 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 UBXN8O00124 270 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SEMG2Q02383 582 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SPIDRQ14159 915 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 IKBKEQ14164 716 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SLC25A52Q3SY17 297 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 KCNN1Q92952 543 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 NDFIP2Q9NV92 336 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SUN2Q9UH99 717 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SORCS3Q9UPU3 1222 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 TSC22D4Q9Y3Q8 395 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 NUMA1Q14980 2115 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 A8MU76 341 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 FFAR3O14843 346 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 GPR42O15529 346 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 MPOP05164 745 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 FMO4P31512 558 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ATICP31939 592 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 FPGSQ05932 587 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 GTF2H3Q13889 308 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 CHSY3Q70JA7 882 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 TAS2R42Q7RTR8 314 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ZNF410Q86VK4 478 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ACMSDQ8TDX5 336 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 C12orf43Q96C57 262 aaKnown RBP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SDCCAG3Q96C92 435 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 PAAF1Q9BRP4 392 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 NAT9Q9BTE0 207 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 APOL5Q9BWW9 433 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ZNF229Q9UJW7 825 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 FZD10Q9ULW2 581 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 SYCE1LA8MT33 242 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 C22orf31O95567 290 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ELNP15502 786 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 EFNA1P20827 205 aaPredicted RBP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 DIO3P55073 304 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 NIPAL4Q0D2K0 466 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ZC3HC1Q86WB0 502 aaKnown RBP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 APLFQ8IW19 511 aaPredicted RBP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 DDHD1Q8NEL9 900 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 TRPV1Q8NER1 839 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ZFRQ96KR1 1074 aaKnown RBP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 TBL1YQ9BQ87 522 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN9-201ENST00000306726 C1orf21Q9H246 121 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 MARCH7Q9H992 704 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 POLE4Q9NR33 117 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ST14Q9Y5Y6 855 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 ZSWIM8A7E2V4 1837 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 NRCAMQ92823 1304 aa14.62□□□□□ -0.07
PTPN9-201ENST00000306726 DHRS12A0PJE2 317 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 AP3B1O00203 1094 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 ENPP3O14638 875 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 AP2A1O95782 977 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 ALBP02768 609 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 NPR3P17342 541 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 PRKACGP22612 351 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 ELK4P28324 431 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 TMED10P49755 219 aaKnown RBP14.61□□□□□ -0.07
PTPN9-201ENST00000306726 GALNT18Q6P9A2 607 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 CDYL2Q8N8U2 506 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 GFM2Q969S9 779 aaKnown RBP14.61□□□□□ -0.07
PTPN9-201ENST00000306726 PNPLA8Q9NP80 782 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 ITM2CQ9NQX7 267 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 RGS18Q9NS28 235 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 PAIP2BQ9ULR5 123 aaKnown RBP14.61□□□□□ -0.07
PTPN9-201ENST00000306726 TRPC5OSA6NMA1 111 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 ZBTB42B2RXF5 422 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 SOAT2O75908 522 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 ABCB1P08183 1280 aaPredicted RBP14.61□□□□□ -0.07
PTPN9-201ENST00000306726 SLC35E2BP0CK96 405 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 FASP25445 335 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 NOS2P35228 1153 aa14.61□□□□□ -0.07
PTPN9-201ENST00000306726 PSEN2P49810 448 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms