RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SHROOM3Q8TF72 1996 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 KMT2BQ9UMN6 2715 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 PLXNB3Q9ULL4 1909 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 PSMD11O00231 422 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 CACNB4O00305 520 aaPredicted RBP26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 HEXIM1O94992 359 aaKnown RBP26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 RASGRP1O95267 797 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 GP1BAP07359 652 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 COMTP21964 271 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 KELP23276 732 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 HK3P52790 923 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 ARHGEF7Q14155 803 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 CNGA3Q16281 694 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 DEFB133Q30KQ1 61 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 HES3Q5TGS1 186 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 ESRP1Q6NXG1 681 aaKnown RBP26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 FSTL5Q8N475 847 aaPredicted RBP26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 PDCD7Q8N8D1 485 aaKnown RBP26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 PLA2G15Q8NCC3 412 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 GLMNQ92990 594 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 WDR92Q96MX6 357 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 MCCC1Q96RQ3 725 aaPredicted RBP26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 KLQ9UEF7 1012 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 PPIL1Q9Y3C6 166 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 PCDHA13Q9Y5I0 950 aa26.5■■□□□ 1.83
CDKN2A-201ENST00000304494 ARID1BQ8NFD5 2236 aaPredicted RBP26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 LMO7DNF2Z398 122 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 ANXA6P08133 673 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 GM2AP17900 193 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 KIAA1024LP59773 190 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 DSC2Q02487 901 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 PPIDQ08752 370 aaKnown RBP26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 CAMK2BQ13554 666 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 ELOCQ15369 112 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 ALG11Q2TAA5 492 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 MARCH9Q86YJ5 346 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 HID1Q8IV36 788 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 PIH1D2Q8WWB5 315 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 NUS1Q96E22 293 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 USP24Q9UPU5 2620 aa26.49■■□□□ 1.83
CDKN2A-201ENST00000304494 FREM2Q5SZK8 3169 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 TDRD6O60522 2096 aaKnown RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 NPIPB15A6NHN6 443 aaPredicted RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 PSTPIP1O43586 416 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 FZD6O60353 706 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 GCATO75600 419 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 CAPNS1P04632 268 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 HOXC4P09017 264 aaPredicted RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 ALPIP09923 528 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 TNNT1P13805 278 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 CTSEP14091 401 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 TRIM23P36406 574 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 EPHB1P54762 984 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 SRP54P61011 504 aaKnown RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 C1orf61Q13536 156 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 PDK1Q15118 436 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 PNCKQ6P2M8 343 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 RFX6Q8HWS3 928 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 CACTIN-AS1Q8N1I8 211 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 SDR16C5Q8N3Y7 309 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 TSACCQ96A04 125 aaPredicted RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 FUBP1Q96AE4 644 aaKnown RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 RNF25Q96BH1 459 aaPredicted RBP26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 LGMNQ99538 433 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 WDR26Q9H7D7 661 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 HYOU1Q9Y4L1 999 aa26.48■■□□□ 1.83
CDKN2A-201ENST00000304494 A0A0A6YYK5 440 aaPredicted RBP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 LY6G6EA0A0G2JKS1 128 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 TRABD2BA6NFA1 517 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 PPP1R12AO14974 1030 aaPredicted RBP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 HLA-DQB2P05538 268 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 PDHA1P08559 390 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 TSHRP16473 764 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 LHCGRP22888 699 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 RPIAP49247 311 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 INSM1Q01101 510 aaPredicted RBP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 DENND2CQ68D51 928 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 CBARPQ8N350 705 aaPredicted RBP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 OR56A4Q8NGH8 313 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 ARRDC2Q8TBH0 407 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 LRRN4Q8WUT4 740 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 SCG3Q8WXD2 468 aaKnown RBP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 TDRD1Q9BXT4 1180 aaKnown RBP26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 DNPEPQ9ULA0 475 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 DOLKQ9UPQ8 538 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 ALG6Q9Y672 507 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 U3KQA8 63 aa26.47■■□□□ 1.83
CDKN2A-201ENST00000304494 PDE2AO00408 941 aaPredicted RBP26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 IPO7O95373 1038 aaKnown RBP26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 TNFP01375 233 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 CTPS1P17812 591 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 CLDN6P56747 220 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 IFI35P80217 286 aaPredicted RBP26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 AP1B1Q10567 949 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 TARDBPQ13148 414 aaKnown RBP eCLIP26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 NR0B2Q15466 257 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 C6orf132Q5T0Z8 1188 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 LVRNQ6Q4G3 990 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 RD3Q7Z3Z2 195 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms