RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CNOT3O75175 753 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF189O75820 626 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ALPIP09923 528 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TSPAN19P0C672 248 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PRG2P13727 222 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 GNSP15586 552 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SPIBQ01892 262 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 OASLQ15646 514 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SMYD1Q8NB12 490 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF398Q8TD17 642 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 NMD3Q96D46 503 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PCDH9Q9HC56 1237 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 INTS7Q9NVH2 962 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SPATA6Q9NWH7 488 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 CA12O43570 354 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 RPLP2P05387 115 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 CD48P09326 243 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PXNP49023 591 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PCDH1Q08174 1060 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 UBAP2LQ14157 1087 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 AFTPHQ6ULP2 937 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 P4HA3Q7Z4N8 544 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 LZTR1Q8N653 840 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ITFG1Q8TB96 612 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 WHRNQ9P202 907 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 FAM237BA0A1B0GVD1 139 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TRAPPC6AO75865 159 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 CCNE2O96020 404 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GNRH1P01148 92 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PSMA3P25788 255 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 HSPB3Q12988 150 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SGCBQ16585 318 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ALG11Q2TAA5 492 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 HGSNATQ68CP4 663 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 CMC1Q7Z7K0 106 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 CATSPER1Q8NEC5 780 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DNASE1L2Q92874 299 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 KCTD15Q96SI1 283 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SERHL2Q9H4I8 314 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SERHLQ9NQF3 203 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TMEM98Q9Y2Y6 226 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 CPSF4LA6NMK7 179 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 H3BM21 787 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 HGFP14210 728 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 NELFEP18615 380 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 AHCYP23526 432 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TAS2R41P59536 307 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 C1orf61Q13536 156 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ZBTB49Q6ZSB9 765 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 RBM43Q6ZSC3 357 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GALNTL5Q7Z4T8 443 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TMBIM4Q9HC24 238 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DEAF1O75398 565 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DBIP07108 87 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 CCNOP22674 350 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 MAGEA9P43362 315 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PTPN5P54829 565 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DLG2Q15700 870 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 KCTD8Q6ZWB6 473 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SYN2Q92777 582 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 MPP4Q96JB8 637 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ART5Q96L15 291 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 MAGEB18Q96M61 343 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PABPC3Q9H361 631 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TMLHEQ9NVH6 421 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ARHGAP28Q9P2N2 729 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SMIM35A0A1B0GVV1 85 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 LDB2O43679 373 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF862O60290 1169 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PAEPP09466 180 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ACP5P13686 325 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GRIA4P48058 902 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 RHAGQ02094 409 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SLC13A2Q13183 592 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GALNT5Q7Z7M9 940 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SIDT2Q8NBJ9 832 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 C19orf18Q8NEA5 215 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 POF1BQ8WVV4 589 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 NCSTNQ92542 709 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 FRMD6Q96NE9 622 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 A0A087X1B8 175 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GLYATL1P3A0A0U1RQE8 302 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DUSP11O75319 330 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ICAM3P32942 547 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 NAGLUP54802 743 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 C2orf80Q0P641 193 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 NAE1Q13564 534 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 AP2M1Q96CW1 435 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 RNF157Q96PX1 679 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 RBCK1Q9BYM8 510 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 NEK6Q9HC98 313 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GGA2Q9UJY4 613 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ARL5AQ9Y689 179 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 MAGEB16A2A368 324 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 CCT8L1PA6NM43 557 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 FAM227AF5H4B4 570 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ATP4AP20648 1035 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 LPOP22079 712 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PLA2G16P53816 162 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms