RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 OTCP00480 354 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF806P0C7X5 589 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ARP10275 920 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ATP5C1P36542 298 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MAPK8P45983 427 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 RPL21P46778 160 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 AP3S2P59780 193 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 PPP3R1P63098 170 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 FOXO4P98177 505 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TYSND1Q2T9J0 566 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 RAP1GAP2Q684P5 730 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SCIMPQ6UWF3 145 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 LRRC70Q7Z2Q7 622 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SLCO6A1Q86UG4 719 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TMC8Q8IU68 726 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GIPC3Q8TF64 312 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 DNAJA4Q8WW22 397 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ATP13A3Q9H7F0 1226 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 CLIC5Q9NZA1 410 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TRAV19A0A0A6YYK7 116 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 H3BRB1 525 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ZMPSTE24O75844 475 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 AP2A2O94973 939 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 HGFP14210 728 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 RPL5P46777 297 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF135P52742 658 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MANFP55145 182 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SLC6A3Q01959 620 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GIT2Q14161 759 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ZBTB6Q15916 424 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GRIK4Q16099 956 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 LYPLAL1Q5VWZ2 237 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 FRRS1Q6ZNA5 592 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 RBM44Q6ZP01 1051 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 OR8H1Q8NGG4 311 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 VANGL1Q8TAA9 524 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF606Q8WXB4 792 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 HTRA1Q92743 480 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MBOAT7Q96N66 472 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 MAP3K14Q99558 947 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TMEM168Q9H0V1 697 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 SLC6A15Q9H2J7 730 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 TUT1Q9H6E5 874 aaKnown RBP10.41□□□□□ -0.74
CLIP1-201ENST00000302528 ABCC13Q9NSE7 274 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 GGA2Q9UJY4 613 aa10.41□□□□□ -0.74
CLIP1-201ENST00000302528 A0A087X0B3 334 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TPD52L2O43399 206 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 FADS2O95864 444 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 IL1BP01584 269 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 MAGP20916 626 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PPIBP23284 216 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 BDNFP23560 247 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 RBL1P28749 1068 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ZCCHC12Q6PEW1 402 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 DGLUCYQ7Z3D6 616 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 RAB43Q86YS6 212 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ARMC10Q8N2F6 343 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PIWIL2Q8TC59 973 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 SNX33Q8WV41 574 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TATDN2Q93075 761 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 EFHD2Q96C19 240 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 EHD1Q9H4M9 534 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PXMP2Q9NR77 195 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 SEMA3GQ9NS98 782 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 DNAJC11Q9NVH1 559 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 UPB1Q9UBR1 384 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 SORCS3Q9UPU3 1222 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 KCNE2Q9Y6J6 123 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 MROH2AA6NES4 1674 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ASTN2O75129 1339 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ATP13A5Q4VNC0 1218 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 SLC27A1Q6PCB7 646 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 KLHL35Q6PF15 583 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF730Q6ZMV8 503 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 QSOX2Q6ZRP7 698 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PSTKQ8IV42 348 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ZZZ3Q8IYH5 903 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 FSTL5Q8N475 847 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ADAMTS15Q8TE58 950 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ZDHHC15Q96MV8 337 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TCF12Q99081 682 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TMEM51Q9NW97 253 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TRPS1Q9UHF7 1281 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PCDHA11Q9Y5I1 949 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 OVOS2A0A0G2JMS6 1433 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 OVOS2A0A0J9YW53 1432 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 OVOS2Q6IE36 1432 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 SH3D21A4FU49 640 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 FGF10O15520 208 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 MATN4O95460 622 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TFEBP19484 476 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ITIH1P19827 911 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 CLCN5P51795 746 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 MAZP56270 477 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 IFI35P80217 286 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 DPYSL3Q14195 570 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 GXYLT1Q4G148 440 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 NAT14Q8WUY8 206 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms