RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 A0A087X0B3 334 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FSCN2O14926 492 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 NRP2O60462 931 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 NADKO95544 446 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 DBTP11182 482 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PERM1Q5SV97 790 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PTCHD4Q6ZW05 846 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF572Q7Z3I7 529 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 DNAJB8Q8NHS0 232 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 MED28Q9H204 178 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 GULP1Q9UBP9 304 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 SLC12A4Q9UP95 1085 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 DERAQ9Y315 318 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 STX16-NPEPL1H3BU86 382 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 STX16O14662 325 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 XYLBO75191 536 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 CCNYL3P0C7X3 344 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 OMPP47874 163 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ACADVLP49748 655 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 NAGLUP54802 743 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 USP43Q70EL4 1123 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 C10orf107Q8IVU9 208 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 LGI2Q8N0V4 545 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 C17orf50Q8WW18 174 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 VMP1Q96GC9 406 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 CENPNQ96H22 339 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 B3GALT6Q96L58 329 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 NOL11Q9H8H0 719 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ENO2P09104 434 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 MTHFRP42898 656 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 GALNT3Q14435 633 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PACS1Q6VY07 963 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RBFAQ8N0V3 343 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PCDH20Q8N6Y1 951 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FAR1Q8WVX9 515 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 SKA1Q96BD8 255 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 INPP4AQ96PE3 977 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 NECTIN3Q9NQS3 549 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 IL17RBQ9NRM6 502 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 XRN1Q8IZH2 1706 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 USP17L7P0C7H9 530 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TPH1P17752 444 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 PTPRNQ16849 979 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TMEM44Q2T9K0 475 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FAM131AQ6UXB0 335 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RASSF6Q6ZTQ3 369 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 TFAP2DQ7Z6R9 452 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 OR4A15Q8NGL6 344 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 ZYG11BQ9C0D3 744 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 EIF2B3Q9NR50 452 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 INTS10Q9NVR2 710 aaKnown RBP7.66□□□□□ -1.18
SF3B3-201ENST00000302516 MARCH2Q9P0N8 246 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 DNMT3LQ9UJW3 386 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 FADS3Q9Y5Q0 445 aa7.66□□□□□ -1.18
SF3B3-201ENST00000302516 RPTORQ8N122 1335 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 FAM86C2PA6NEL3 165 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 CHP2O43745 196 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 PLOD3O60568 738 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 STX12Q86Y82 276 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 DEFB106AQ8N104 65 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 FAM47BQ8NA70 645 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 ARRDC4Q8NCT1 418 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 SEMA3GQ9NS98 782 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 MKLN1Q9UL63 735 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 A0A1W2PQ72 361 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 F8VP50 259 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 PLK1P53350 603 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 TAS2R41P59536 307 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 ZYG11AQ6WRX3 759 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 MEIOBQ8N635 442 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 TRNAU1APQ9NX07 287 aaKnown RBP7.65□□□□□ -1.18
SF3B3-201ENST00000302516 COL1A2P08123 1366 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 ORC5O43913 435 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 BMP7P18075 431 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 RGS1Q08116 209 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 FNBP1LQ5T0N5 605 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 HECTD3Q5T447 861 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 CPSF7Q8N684 471 aaKnown RBP7.65□□□□□ -1.18
SF3B3-201ENST00000302516 DNAJB14Q8TBM8 379 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 BAIAP2Q9UQB8 552 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 TNFSF13BQ9Y275 285 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 ARHGEF33A8MVX0 844 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 OR10H3O60404 316 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 CCNKO75909 580 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 PGK1P00558 417 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 FESP07332 822 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 TFEBP19484 476 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 NR4A1P22736 598 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 IGFBP5P24593 272 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 KBTBD2Q8IY47 623 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 OR2T12Q8NG77 320 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 MFSD14AQ96MC6 490 aa7.65□□□□□ -1.18
SF3B3-201ENST00000302516 MRTO4Q9UKD2 239 aaKnown RBP7.65□□□□□ -1.18
SF3B3-201ENST00000302516 H3BRB1 525 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 GJB6O95452 261 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 HLA-DQA2P01906 255 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 BNIP1Q12981 228 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 HERC3Q15034 1050 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 CPTPQ5TA50 214 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms