RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TRBC1P01850 177 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 UGT2B4P06133 528 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 LPOP22079 712 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PDE1BQ01064 536 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 MPP2Q14168 576 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 ZSWIM9Q86XI8 627 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PHTF2Q8N3S3 785 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 ZNF366Q8N895 744 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 C2CD4AQ8NCU7 369 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 OR4K2Q8NGD2 314 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 VOPP1Q96AW1 172 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 SUDS3Q9H7L9 328 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 BRD9Q9H8M2 597 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 MAGEE1Q9HCI5 957 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 MLXIPLQ9NP71 852 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 TBC1D3BA6NDS4 549 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 OR51F1A6NGY5 319 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 A6NNZ2 444 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 TPP1O14773 563 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 GOT2P00505 430 aaKnown RBP13.02□□□□□ -0.33
CCDC7-202ENST00000302316 SLC18A2Q05940 514 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 DNAJC3Q13217 504 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 HTR4Q13639 388 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 LRRC14Q15048 493 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 TUBB8Q3ZCM7 444 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 GDPD4Q6W3E5 623 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 TIFABQ6ZNK6 161 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 TTC30BQ8N4P2 665 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 DCLK2Q8N568 766 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 ECHDC3Q96DC8 303 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 APOPT1Q96IL0 206 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 VPS39Q96JC1 886 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.33
CCDC7-202ENST00000302316 HEPHQ9BQS7 1158 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 GPR63Q9BZJ6 419 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 RHOJQ9H4E5 214 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 MTG2Q9H4K7 406 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 PCMTD2Q9NV79 361 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 FBXO5Q9UKT4 447 aa13.02□□□□□ -0.33
CCDC7-202ENST00000302316 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CCDC162PA2VCL2 907 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CAPN8A6NHC0 703 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 ARNTLO00327 626 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 COPEO14579 308 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 STX7O15400 261 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SHOX2O60902 331 aaPredicted RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 AHSGP02765 367 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 ALDOAP04075 364 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CCNFP41002 786 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 EIF2DP41214 584 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CD151P48509 253 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 TERF2Q15554 542 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 KIAA0408Q6ZU52 694 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 LYSMD3Q7Z3D4 306 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 ZC3HC1Q86WB0 502 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SFTPA1Q8IWL2 248 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 LMNTD2Q8IXW0 634 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 DYDC1Q8WWB3 177 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 ATXN2LQ8WWM7 1075 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CHFRQ96EP1 664 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CDKN2AIPNLQ96HQ2 116 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 PSD3Q9NYI0 1048 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 PHTF1Q9UMS5 762 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 WASF2Q9Y6W5 498 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 EYSQ5T1H1 3165 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 C1orf232A0A0U1RR37 186 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 GRXCR2A6NFK2 248 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 LEFTY1O75610 366 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 ZWINTO95229 277 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 KCNA5P22460 613 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 GABRB3P28472 473 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 HNF1BP35680 557 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SERPINB8P50452 374 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SEPT7Q16181 437 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 PREPLQ4J6C6 727 aaPredicted RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 AFTPHQ6ULP2 937 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SH2D5Q6ZV89 423 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 USP45Q70EL2 814 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 TAX1BP1Q86VP1 789 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CILP2Q8IUL8 1156 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 NDUFAF2Q8N183 169 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 OR4L1Q8NH43 312 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 UCMAQ8WVF2 138 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SGSM3Q96HU1 749 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 KLHL32Q96NJ5 620 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 SRPK1Q96SB4 655 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 IQCGQ9H095 443 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 BPIFA1Q9NP55 256 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 CATSPERZQ9NTU4 200 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 IL36AQ9UHA7 158 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms