RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SH3PXD2BA1X283 911 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 E7ENX8 843 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 TPST1O60507 370 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 ODC1P11926 461 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 CCNCP24863 283 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 PIGGQ5H8A4 983 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
CTDP1-202ENST00000299543 IL23RQ5VWK5 629 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 PM20D1Q6GTS8 502 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 DENND5AQ6IQ26 1287 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 BHLHA9Q7RTU4 235 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 PIM3Q86V86 326 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 PGAM4Q8N0Y7 254 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 OR10T2Q8NGX3 314 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 AGO3Q9H9G7 860 aaKnown RBP13.5□□□□□ -0.25
CTDP1-202ENST00000299543 ZDHHC7Q9NXF8 308 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 BCAP29Q9UHQ4 241 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 FAM32AQ9Y421 112 aaKnown RBP13.5□□□□□ -0.25
CTDP1-202ENST00000299543 NOX1Q9Y5S8 564 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 RAD54BQ9Y620 910 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 PTCH2Q9Y6C5 1203 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 J3KR12 359 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 SDHDO14521 159 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 MATN3O15232 486 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 PSMD3O43242 534 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ATP5F1P24539 256 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 THPOP40225 353 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 DDR2Q16832 855 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 GPR158Q5T848 1215 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 KRT80Q6KB66 452 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 Q8N9G6 341 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 RDH11Q8TC12 318 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 HDAC10Q969S8 669 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 MRPL57Q9BQC6 102 aaKnown RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 SIAEQ9HAT2 523 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 C6orf203Q9P0P8 240 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 DSEQ9UL01 958 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 TCAF2A6NFQ2 919 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 SLCO1B7G3V0H7 640 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ARCN1P48444 511 aaKnown RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ADAM17P78536 824 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 FAM110CQ1W6H9 321 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 RAB41Q5JT25 222 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 SETD3Q86TU7 594 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 CUZD1Q86UP6 607 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ANKRD49Q8WVL7 239 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 MRGPRX2Q96LB1 330 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 FCRL5Q96RD9 977 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 TBC1D23Q9NUY8 699 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 A0A1W2PQH9 124 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 PSMD12O00232 456 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 IRAK2O43187 625 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 RNASEH2AO75792 299 aaKnown RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 TBX18O95935 607 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 S100BP04271 92 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 PCYT1AP49585 367 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 DSC2Q02487 901 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ADGRE1Q14246 886 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 CIR1Q86X95 450 aaPredicted RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 BLOC1S5Q8TDH9 187 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ZC3H15Q8WU90 426 aaKnown RBP13.49□□□□□ -0.25
CTDP1-202ENST00000299543 RSPH1Q8WYR4 309 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 RTP3Q9BQQ7 232 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 OSBPL2Q9H1P3 480 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 NMUR1Q9HB89 426 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 ENTPD7Q9NQZ7 604 aa13.49□□□□□ -0.25
CTDP1-202ENST00000299543 AP3B1O00203 1094 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 CD247P20963 164 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 NR4A1P22736 598 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 CYP2A13Q16696 494 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 CLVS1Q8IUQ0 354 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 LRTOMTQ8WZ04 291 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 GPR78Q96P69 363 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 EPB41L1Q9H4G0 881 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 SP110Q9HB58 689 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 PTGDR2Q9Y5Y4 395 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 A8MT66 165 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 E9PAM4 449 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 KDM1AO60341 852 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 GJB3O75712 270 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 ARL1P40616 181 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 EFEMP1Q12805 493 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 SLC39A12Q504Y0 691 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 AFAP1L2Q8N4X5 818 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 PGAP3Q96FM1 320 aaPredicted RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 TPK1Q9H3S4 243 aa13.48□□□□□ -0.25
CTDP1-202ENST00000299543 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
CTDP1-202ENST00000299543 AURKCQ9UQB9 309 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms