RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 KCNV2Q8TDN2 545 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 TLCD1Q96CP7 247 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 EID2BQ96D98 161 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 MRRFQ96E11 262 aaKnown RBP24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 CENPHQ9H3R5 247 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 UGT1A7Q9HAW7 530 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 UGT1A10Q9HAW8 530 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 UGT1A8Q9HAW9 530 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 NLE1Q9NVX2 485 aaPredicted RBP24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 CACNA2D2Q9NY47 1150 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 PSMC3IPQ9P2W1 217 aaPredicted RBP24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 ZNF180Q9UJW8 692 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 STON1Q9Y6Q2 735 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 CKAP5Q14008 2032 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 ATG2BQ96BY7 2078 aa24.7■■□□□ 1.54
GTF2A1-201ENST00000298173 CAPN8A6NHC0 703 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 C2orf81A6NN90 581 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 LPOP22079 712 aaPredicted RBP24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 ARSDP51689 593 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 POLR2LP62875 67 aaKnown RBP24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 PON2Q15165 354 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 ZNF805Q5CZA5 627 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 CNTN4Q8IWV2 1026 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 ZNF513Q8N8E2 541 aaPredicted RBP24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 PRSS16Q9NQE7 514 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 SARDHQ9UL12 918 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 ZNF711Q9Y462 761 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 BUD23O43709 281 aaKnown RBP24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 EGFP01133 1207 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 PRNPP04156 253 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 DRD1P21728 446 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 HMGCLP35914 325 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 PDE1BQ01064 536 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 OR13C4Q8NGS5 318 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 OR8D1Q8WZ84 308 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 DNAJC1Q96KC8 554 aaKnown RBP24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 AGAP2Q99490 1192 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 C19orf43Q9BQ61 176 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 ZFATQ9P243 1243 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 TBK1Q9UHD2 729 aa24.69■■□□□ 1.54
GTF2A1-201ENST00000298173 HMGB1P1B2RPK0 211 aaPredicted RBP24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 SLC7A4O43246 635 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 RNF40O75150 1001 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 FAM155BO75949 473 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 UGP2Q16851 508 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 KCTD16Q68DU8 428 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 NDUFAF2Q8N183 169 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 MAFAQ8NHW3 353 aaPredicted RBP24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 HDAC10Q969S8 669 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 MSANTD3Q96H12 275 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 CDKN2AIPNLQ96HQ2 116 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 TBATAQ96M53 351 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 IL17CQ9P0M4 197 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 BCCIPQ9P287 314 aaKnown RBP eCLIP24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 SLC17A6Q9P2U8 582 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 NOVA2Q9UNW9 492 aaKnown RBP24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 PSAT1Q9Y617 370 aa24.68■■□□□ 1.54
GTF2A1-201ENST00000298173 A0A0U1RQS6 177 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 GOLGA8TH3BQL2 631 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 EPHX1P07099 455 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 INHBAP08476 426 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 TIMP2P16035 220 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 SLC44A4Q53GD3 710 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 TPRG1Q6ZUI0 275 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 LYSMD3Q7Z3D4 306 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 RASSF3Q86WH2 238 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 CHPFQ8IZ52 775 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 OR4K2Q8NGD2 314 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 MZB1Q8WU39 189 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 MCMBPQ9BTE3 642 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 IARS2Q9NSE4 1012 aaKnown RBP24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 OGFRQ9NZT2 677 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 GGT7Q9UJ14 662 aa24.67■■□□□ 1.54
GTF2A1-201ENST00000298173 RPP40O75818 363 aaKnown RBP24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 TIE1P35590 1138 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 GRSF1Q12849 480 aaKnown RBP eCLIP24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 PAF1Q8N7H5 531 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 MFSD1Q9H3U5 465 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 ZFYVE1Q9HBF4 777 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 IKBKGQ9Y6K9 419 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 NPIPB15A6NHN6 443 aaPredicted RBP24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 C16orf96A6NNT2 1141 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 CCL22O00626 93 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 OAS2P29728 719 aaKnown RBP24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 CAMK2GQ13555 558 aaPredicted RBP24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 SMAD1Q15797 465 aaKnown RBP24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 NEPROQ6NW34 567 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 CRTC1Q6UUV9 634 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 USP45Q70EL2 814 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 ADHFE1Q8IWW8 467 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 PIP4K2CQ8TBX8 421 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 SGSM3Q96HU1 749 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 CPNE1Q99829 537 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 GPR63Q9BZJ6 419 aa24.66■■□□□ 1.54
GTF2A1-201ENST00000298173 SCN8AQ9UQD0 1980 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 HMX2A2RU54 273 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 H7C0S8 307 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 CLDN7O95471 211 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 SEC13P55735 322 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 TMPRSS15P98073 1019 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms