RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ING5Q8WYH8 240 aa14.3□□□□□ -0.12
C9orf3-202ENST00000297979 RMDN2Q96LZ7 410 aa14.3□□□□□ -0.12
C9orf3-202ENST00000297979 ZSWIM3Q96MP5 696 aa14.3□□□□□ -0.12
C9orf3-202ENST00000297979 C7orf26Q96N11 449 aa14.3□□□□□ -0.12
C9orf3-202ENST00000297979 ABCF3Q9NUQ8 709 aa14.3□□□□□ -0.12
C9orf3-202ENST00000297979 MARCH4Q9P2E8 410 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-202ENST00000297979 RABL2AQ9UBK7 228 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-202ENST00000297979 YBX2Q9Y2T7 364 aaKnown RBP14.3□□□□□ -0.12
C9orf3-202ENST00000297979 MYO7AQ13402 2215 aa14.3□□□□□ -0.12
C9orf3-202ENST00000297979 CCDC162PA2VCL2 907 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 C2orf81A6NN90 581 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 NEDD8-MDP1E9PL57 170 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 TGDSO95455 350 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 COL6A2P12110 1019 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 TCF3P15923 654 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 HLA-FP30511 346 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 SLC12A2P55011 1212 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CORO7P57737 925 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 MBLAC2Q68D91 279 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 MRNIPQ6NTE8 343 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CEP97Q8IW35 865 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 GPR150Q8NGU9 434 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 C17orf50Q8WW18 174 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 BBS2Q9BXC9 721 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 C1QTNF1Q9BXJ1 281 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 TRIM55Q9BYV6 548 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 PIDD1Q9HB75 910 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 NMRAL1Q9HBL8 299 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 KLF15Q9UIH9 416 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 ACOT9Q9Y305 439 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 MRPS23Q9Y3D9 190 aaKnown RBP14.29□□□□□ -0.12
C9orf3-202ENST00000297979 USH1CQ9Y6N9 552 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CD3EAPO15446 510 aaKnown RBP14.29□□□□□ -0.12
C9orf3-202ENST00000297979 FZD6O60353 706 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CPA3P15088 417 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 MAPK8P45983 427 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CSNK1DP48730 415 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 ILF2Q12905 390 aaKnown RBP14.29□□□□□ -0.12
C9orf3-202ENST00000297979 STX3Q13277 289 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 RBM20Q5T481 1227 aaKnown RBP14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CES4AQ5XG92 561 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 ZNF398Q8TD17 642 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 IRF7Q92985 503 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 MYO19Q96H55 970 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 CDKN2AIPNLQ96HQ2 116 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 OMDQ99983 421 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 SPHK2Q9NRA0 654 aa14.29□□□□□ -0.12
C9orf3-202ENST00000297979 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 S1PR4O95977 384 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 APOA4P06727 396 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 FGF3P11487 239 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 PSMA3P25788 255 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 TAS2R39P59534 338 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 OCRLQ01968 901 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ZNF460Q14592 562 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 FUT11Q495W5 492 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 LDB1Q86U70 411 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 C10orf107Q8IVU9 208 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ARID3BQ8IVW6 561 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 C10orf67Q8IYJ2 551 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 EFHBQ8N7U6 833 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 OR4K2Q8NGD2 314 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 OR4L1Q8NH43 312 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 SMG7Q92540 1137 aaKnown RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 SMIM14Q96QK8 99 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 NDNQ99608 321 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 CATSPERZQ9NTU4 200 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 UTP6Q9NYH9 597 aaKnown RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 HACD3Q9P035 362 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 MID2Q9UJV3 735 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ITM2BQ9Y287 266 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 PCDHB9Q9Y5E1 797 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ATG2AQ2TAZ0 1938 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 A0A087X1B8 175 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 SNNO75324 88 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 IGSF6O95976 241 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 SLC4A1P02730 911 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 OGNP20774 298 aaKnown RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 LPOP22079 712 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 SLC8A1P32418 973 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 GRIA4P48058 902 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 PGGT1BP53609 377 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 EPHB1P54762 984 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 LACTB2Q53H82 288 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ARMC12Q5T9G4 340 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 TNS4Q8IZW8 715 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 ZNF557Q8N988 423 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 OR6K2Q8NGY2 324 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 KCTD4Q8WVF5 259 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 OTUB2Q96DC9 234 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 TSPAN17Q96FV3 270 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 LINC00597Q9H2U6 94 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 TLE6Q9H808 572 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 EVLQ9UI08 416 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 FBXO9Q9UK97 447 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 BPTFQ12830 3046 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms