RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 UHRF1Q96T88 793 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TCF12Q99081 682 aa10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MRPS26Q9BYN8 205 aaKnown RBP10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MUC13Q9H3R2 512 aa10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TFB2MQ9H5Q4 396 aaKnown RBP10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SLC24A3Q9HC58 644 aa10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 C8orf4Q9NR00 106 aa10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PCDHGA7Q9Y5G6 932 aa10.04□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TMEM88BA6NKF7 163 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRIM24O15164 1050 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PFDN6O15212 129 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LDB2O43679 373 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PRAMEF11O60813 436 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SORBS2O94875 1100 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 JUNP05412 331 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 F7P08709 466 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ATXN1LP0C7T5 689 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZCCHC18P0CG32 403 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CD9P21926 228 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 YWHAQP27348 245 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RPL5P46777 297 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RHDQ02161 417 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ITKQ08881 620 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GRIK2Q13002 908 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 POLD3Q15054 466 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRIM71Q2Q1W2 868 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 C5orf22Q49AR2 442 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RASIP1Q5U651 963 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FOXB2Q5VYV0 432 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 REP15Q6BDI9 236 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 C8orf82Q6P1X6 216 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SLC24A5Q71RS6 500 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 KLHDC9Q8NEP7 349 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 OR6P1Q8NGX9 317 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 BRSK1Q8TDC3 778 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 HOPXQ9BPY8 73 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SYTL2Q9HCH5 934 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NDUFAF1Q9Y375 327 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CAPN8A6NHC0 703 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MRASO14807 208 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CFLARO15519 480 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DNAJA2O60884 412 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 YY1P25490 414 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ATP6V0D1P61421 351 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FAM189BP81408 668 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SLC10A7Q0GE19 358 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PDAP1Q13442 181 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF235Q14590 738 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RBBP5Q15291 538 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LRRC36Q1X8D7 754 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TYSND1Q2T9J0 566 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF280DQ6N043 979 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ISCA2Q86U28 154 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CHCHD4Q8N4Q1 142 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRIB2Q92519 343 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PABPC5Q96DU9 382 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 C19orf60Q96EN9 201 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ADA2Q9NZK5 511 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GMIPQ9P107 970 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 THEGQ9P2T0 379 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 UXTQ9UBK9 157 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CROTQ9UKG9 612 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NOD1Q9Y239 953 aa10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MTF2Q9Y483 593 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TCRBV3S1A0A5B6 114 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SYCE1LA8MT33 242 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TXNDC9O14530 226 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CD3EAPO15446 510 aaKnown RBP10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 NRP2O60462 931 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 MATN4O95460 622 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CRTAMO95727 393 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ASGR1P07306 291 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 HNRNPLP14866 589 aaKnown RBP eCLIP10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SLC7A1P30825 629 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PKNOX1P55347 436 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 DSC2Q02487 901 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PABPC1LQ4VXU2 614 aaKnown RBP10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 AGKQ53H12 422 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 LARP4Q71RC2 724 aaKnown RBP eCLIP10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SPATA24Q86W54 205 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 COLGALT2Q8IYK4 626 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PACRGLQ8N7B6 248 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 PHC3Q8NDX5 983 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 HASPINQ8TF76 798 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 HDAC10Q969S8 669 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 ZUFSPQ96AP4 578 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 SGF29Q96ES7 293 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 TMA16Q96EY4 203 aaKnown RBP10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 NDNQ99608 321 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 CCT7Q99832 543 aa10.02□□□□□ -0.81
TNFRSF11B-201ENST00000297350 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms