RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 OR9I1Q8NGQ6 314 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PTCD3Q96EY7 689 aaKnown RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 IL12RB2Q99665 862 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SLC39A3Q9BRY0 314 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 OXSMQ9NWU1 459 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CD274Q9NZQ7 290 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 RNF112Q9ULX5 631 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PCDHB12Q9Y5F1 795 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 DOCK4Q8N1I0 1966 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 OR6C75A6NL08 312 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SMIM24O75264 130 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SLC6A4P31645 630 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CDK7P50613 346 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 KPNA2P52292 529 aaKnown RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 STX1BP61266 288 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 GPR17Q13304 367 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 ARMC12Q5T9G4 340 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 TMEM154Q6P9G4 183 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 LRRC74BQ6ZQY2 392 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CENPLQ8N0S6 344 aaPredicted RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PIP4K2CQ8TBX8 421 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 BCL7CQ8WUZ0 217 aaPredicted RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 ASIC4Q96FT7 647 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF570Q96NI8 536 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 GPR22Q99680 433 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 EGFL8Q99944 293 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 RNF38Q9H0F5 515 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 YY1AP1Q9H869 796 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 LATS2Q9NRM7 1088 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 NMRK1Q9NWW6 199 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 NSMCE4AQ9NXX6 385 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 AGO1Q9UL18 857 aaKnown RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SLC30A1Q9Y6M5 507 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 TANC1Q9C0D5 1861 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 COCHO43405 550 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 LTA4HP09960 611 aaKnown RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 LINC00032P0C843 101 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PIK3R1P27986 724 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SGSHP51688 502 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SLC34A1Q06495 639 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 TRIM60Q495X7 471 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 WASHC2DQ5SRD0 308 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 TMCO4Q5TGY1 634 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CAMK1DQ8IU85 385 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PGBD5Q8N414 524 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 OR4L1Q8NH43 312 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CDC26Q8NHZ8 85 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 ANKRD27Q96NW4 1050 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 KCNA7Q96RP8 456 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SLC22A12Q96S37 553 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CXorf56Q9H5V9 222 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CATSPERZQ9NTU4 200 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PPM1HQ9ULR3 514 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 RAP2CQ9Y3L5 183 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 C2orf81A6NN90 581 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 OR1I1O60431 355 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 HNRNPCL1O60812 293 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 FKTNO75072 461 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SNNO75324 88 aaPredicted RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SH3BGRLO75368 114 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 STAMBPO95630 424 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 URODP06132 367 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 GABRR2P28476 465 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 MZF1P28698 734 aaPredicted RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CRABP2P29373 138 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 VHLP40337 213 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 TUFMP49411 452 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CDKN2DP55273 166 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CREB5Q02930 508 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 BTKQ06187 659 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 RALGDSQ12967 914 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 NAB1Q13506 487 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 IKBKEQ14164 716 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 FLOT2Q14254 428 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 FAM151BQ6UXP7 276 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CACUL1Q86Y37 369 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CLDN19Q8N6F1 224 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 NAT16Q8N8M0 369 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 WBP2Q969T9 261 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 FUBP3Q96I24 572 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 PANX3Q96QZ0 392 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SEPT3Q9UH03 358 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 EVLQ9UI08 416 aaPredicted RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ANGPTL2Q9UKU9 493 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SYN3O14994 580 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SEC24AO95486 1093 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ATF6P18850 670 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 FGFR3P22607 806 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CES1P23141 567 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 PAX3P23760 479 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF33AQ06730 810 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 DSC1Q08554 894 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 INSCQ1MX18 579 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 PTRHD1Q6GMV3 140 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 NADSYN1Q6IA69 706 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms