RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RIBC2Q9H4K1 309 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 TMEM161AQ9NX61 479 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 PTTG2Q9NZH5 202 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 STK39Q9UEW8 545 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 FADS3Q9Y5Q0 445 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 CCL22O00626 93 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 ALOX12P18054 663 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 HALP42357 657 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 DEFA1P59665 94 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 DEFA3P59666 94 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 GRM3Q14832 879 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 FSTL4Q6MZW2 842 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 LDB1Q86U70 411 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 CROCCP3Q8IVE0 287 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 ZNF557Q8N988 423 aaPredicted RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 VPS37AQ8NEZ2 397 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 FNIP1Q8TF40 1166 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 HSFY1Q96LI6 401 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
HPS3-201ENST00000296051 SDCBP2Q9H190 292 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 DEC1Q9P2X7 70 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 HMGXB4Q9UGU5 601 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
HPS3-201ENST00000296051 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 MFSD11O43934 449 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 CLTBP09497 229 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 SLC2A4P14672 509 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 NPY2RP49146 381 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 MAXP61244 160 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 INSCQ1MX18 579 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 DEPDC1Q5TB30 811 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 PTGR2Q8N8N7 351 aaPredicted RBP13.47□□□□□ -0.25
HPS3-201ENST00000296051 ITFG1Q8TB96 612 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 DDX1Q92499 740 aaKnown RBP13.47□□□□□ -0.25
HPS3-201ENST00000296051 SLC39A3Q9BRY0 314 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 TEX12Q9BXU0 123 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 ZMYM5Q9UJ78 669 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 EVPLLA8MZ36 301 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 LYPLA2O95372 231 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 GNAZP19086 355 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 PGGT1BP53609 377 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 FAM98BQ52LJ0 330 aaKnown RBP13.47□□□□□ -0.25
HPS3-201ENST00000296051 FUT10Q6P4F1 479 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 DRICH1Q6PGQ1 229 aaPredicted RBP13.47□□□□□ -0.25
HPS3-201ENST00000296051 FBXO39Q8N4B4 442 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 TCF12Q99081 682 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 RBBP8Q99708 897 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 LPIN3Q9BQK8 851 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 ATAD3AQ9NVI7 634 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 SH3GLB1Q9Y371 365 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 MYH3P11055 1940 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 LOC100506127A0A0U1RQW1 187 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 PDLIM1O00151 329 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 XIAPP98170 497 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 SLC39A4Q6P5W5 647 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 ABRAXAS1Q6UWZ7 409 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 ANKRD52Q8NB46 1076 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 CXorf21Q9HAI6 301 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 IMPAD1Q9NX62 359 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 FBXO5Q9UKT4 447 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 MYH11P35749 1972 aa13.47□□□□□ -0.25
HPS3-201ENST00000296051 NEDD8-MDP1E9PL57 170 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TOR1BO14657 336 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 SORBS2O94875 1100 aaKnown RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 GNRH1P01148 92 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 LINC00032P0C843 101 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 FCGR1AP12314 374 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 AMD1P17707 334 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 CCNA2P20248 432 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 ITGAXP20702 1163 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 ATP5F1P24539 256 aaPredicted RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 YAP1P46937 504 aaKnown RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 IRF9Q00978 393 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 UBR7Q8N806 425 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 PSMA8Q8TAA3 256 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 METTL6Q8TCB7 284 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 DENND1AQ8TEH3 1009 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 PPP1R16AQ96I34 528 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 IL22Q9GZX6 179 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 ABCG4Q9H172 646 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 ZC4H2Q9NQZ6 224 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 VPS45Q9NRW7 570 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3DA0A087WVF3 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3IA0A087WXS9 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3EA0A087X179 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3KA0A087X1G2 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3FA6NER0 549 aaPredicted RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 A6NHS1 94 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3LB9A6J9 549 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms