RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 C1orf232A0A0U1RR37 186 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 PRR23AA6NEV1 266 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 FAM47DPA6NHR8 397 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 AP3B1O00203 1094 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 AURKAO14965 403 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 TSPAN6O43657 245 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 PCDH8O95206 1070 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 POU6F1Q14863 301 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 CNGA3Q16281 694 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 LRRC66Q68CR7 880 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 DENND2CQ68D51 928 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 FBXO25Q8TCJ0 367 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 SPACA7Q96KW9 195 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 PREBQ9HCU5 417 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 HACD3Q9P035 362 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 PLXNA2O75051 1894 aa27.79■■■□□ 2.04
CHCHD4-201ENST00000295767 CLDN7O95471 211 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 SEMA4FO95754 770 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 MAGEA3P43357 314 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 LIPIQ6XZB0 460 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 SRPK1Q96SB4 655 aaKnown RBP27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 LRFN3Q9BTN0 628 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 ANKZF1Q9H8Y5 726 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 MBD1Q9UIS9 605 aaPredicted RBP27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 CUL9Q8IWT3 2517 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3DA0A087WVF3 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3IA0A087WXS9 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3EA0A087X179 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3KA0A087X1G2 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3FA6NER0 549 aaPredicted RBP27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3LB9A6J9 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 SLC4A1P02730 911 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3HP0C7X1 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 MGAT1P26572 445 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 LIG3P49916 1009 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 CAV1Q03135 178 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 ARHGEF7Q14155 803 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 FNBP1LQ5T0N5 605 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3GQ6DHY5 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3CQ6IPX1 549 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 GLT6D1Q7Z4J2 308 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 IFT20Q8IY31 132 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TBC1D3Q8IZP1 549 aaPredicted RBP27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 OR2T34Q8NGX1 318 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 CXorf40AQ8TE69 158 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 IFT81Q8WYA0 676 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 UBXN4Q92575 508 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 NELL1Q92832 810 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 FRMD8Q9BZ67 464 aaPredicted RBP27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 TRABDQ9H4I3 376 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 ZFYVE1Q9HBF4 777 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 ZDHHC18Q9NUE0 388 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 BFARQ9NZS9 450 aa27.78■■■□□ 2.04
CHCHD4-201ENST00000295767 ZNF106Q9H2Y7 1883 aaKnown RBP27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 LRRC72A6NJI9 287 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 H0Y858 1186 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 GALR2O43603 387 aaPredicted RBP27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 ELFN1P0C7U0 828 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 SP9P0CG40 484 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 ZNF30P17039 623 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 NPY2RP49146 381 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 CARSP49589 748 aaKnown RBP27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 CRADDP78560 199 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 ZNF528Q3MIS6 628 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 TTC30BQ8N4P2 665 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 BRSK1Q8TDC3 778 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 EID2BQ96D98 161 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 GPR174Q9BXC1 333 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 FAM126AQ9BYI3 521 aaPredicted RBP27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 GPR63Q9BZJ6 419 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 SYBUQ9NX95 663 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 ZFR2Q9UPR6 939 aaKnown RBP27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 ARL5AQ9Y689 179 aa27.77■■■□□ 2.04
CHCHD4-201ENST00000295767 THADAQ6YHU6 1953 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 ABCA7Q8IZY2 2146 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 MMP20O60882 483 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 RNGTTO60942 597 aaKnown RBP27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 NUBP1P53384 320 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 PPP2CBP62714 309 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 PPP2CAP67775 309 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 PTSQ03393 145 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 HIF1AQ16665 826 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 MSS51Q4VC12 460 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 SEL1L3Q68CR1 1132 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 AGGF1Q8N302 714 aaeCLIP27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 MPP5Q8N3R9 675 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 ZCCHC9Q8N567 271 aaKnown RBP27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 IL22Q9GZX6 179 aa27.76■■■□□ 2.03
CHCHD4-201ENST00000295767 FANCMQ8IYD8 2048 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 C1SP09871 688 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 C6P13671 934 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 BCKDHBP21953 392 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 SEPT6Q14141 434 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 HLTFQ14527 1009 aaKnown RBP eCLIP27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 TAF1AQ15573 450 aaPredicted RBP27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 ERCC6LQ2NKX8 1250 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 CCDC38Q502W7 563 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 KIAA1161Q6NSJ0 714 aa27.75■■■□□ 2.03
CHCHD4-201ENST00000295767 NEK5Q6P3R8 708 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms