RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 GTF2IRD1Q9UHL9 959 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 IPO11Q9UI26 975 aaKnown RBP14.75□□□□□ -0.05
CCNF-201ENST00000293968 PIP5K1BO14986 540 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 GNA12Q03113 381 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 BFSP2Q13515 415 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TECRLQ5HYJ1 363 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 CMTR2Q8IYT2 770 aaKnown RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 CLEC4FQ8N1N0 589 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TSPAN17Q96FV3 270 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 BIRC8Q96P09 236 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 RANBP9Q96S59 729 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 KCTD14Q9BQ13 255 aaPredicted RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 HIPK3Q9H422 1215 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TMEM181Q9P2C4 612 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 PIRO00625 290 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 MSI1O43347 362 aaKnown RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 B4GAT1O43505 415 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 GRB7Q14451 532 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TFAP2DQ7Z6R9 452 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TAC4Q86UU9 113 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TOP1MTQ969P6 601 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 MAELQ96JY0 434 aaKnown RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 MUC3BQ9H195 1237 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 SEMA4BQ9NPR2 832 aaPredicted RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 GID8Q9NWU2 228 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 DERAQ9Y315 318 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 CITO14578 2027 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 UBA6A0AVT1 1052 aaPredicted RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 KCNH1O95259 989 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 ALBP02768 609 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 ARNTP27540 789 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 EEF1DP29692 281 aaKnown RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 MAGEA10P43363 369 aaPredicted RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 PPIL2Q13356 520 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 OR6J1Q8NGC5 347 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 GABPB2Q8TAK5 448 aaPredicted RBP14.74□□□□□ -0.05
CCNF-201ENST00000293968 CCDC138Q96M89 665 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 FAIMQ9NVQ4 179 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 TIMM22Q9Y584 194 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 COMMD10Q9Y6G5 202 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 ANKRD12Q6UB98 2062 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 ARPC2O15144 300 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 HLA-DQB2P05538 268 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 WNT3AP56704 352 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 NR1D2Q14995 579 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 PSMD5Q16401 504 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 SLC22A9Q8IVM8 553 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 ANKFN1Q8N957 763 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 PCED1BQ96HM7 432 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 CCDC90BQ9GZT6 254 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 RGS18Q9NS28 235 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 COQ6Q9Y2Z9 468 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 VWA7Q9Y334 891 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 SH3BP1Q9Y3L3 701 aa14.74□□□□□ -0.05
CCNF-201ENST00000293968 NRCAMQ92823 1304 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 H3BMQ9 156 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 UBFD1O14562 309 aaKnown RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 ALDOCP09972 364 aaKnown RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 CD247P20963 164 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 BDNFP23560 247 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 ECT2LQ008S8 904 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 PAQR9Q6ZVX9 377 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 DPP9Q86TI2 863 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SLC15A3Q8IY34 581 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 DCBLD1Q8N8Z6 715 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 CENPNQ96H22 339 aaPredicted RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 COX4I2Q96KJ9 171 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 COG8Q96MW5 612 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 KLHL5Q96PQ7 755 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SLC2A13Q96QE2 648 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 C1orf50Q9BV19 199 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 TRNAU1APQ9NX07 287 aaKnown RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 CD300AQ9UGN4 299 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SUPT3HB4E1H0 165 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 H0YJX3 145 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SNAP29O95721 258 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 FUT4P22083 530 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 ZBTB6Q15916 424 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 IRGQQ8WZA9 623 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SEPT8Q92599 483 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 BORCS5Q969J3 196 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SENP8Q96LD8 212 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 NSUN5Q96P11 429 aaKnown RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 SMOQ99835 787 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 NPLQ9BXD5 320 aaPredicted RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 CCM2LQ9NUG4 571 aaPredicted RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 CNMDO75829 334 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 F9P00740 461 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 PIRTP0C851 137 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 BMP2P12643 396 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 CAPN3P20807 821 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 CCR1P32246 355 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 APLP1P51693 650 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 KCNK10P57789 538 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 CTBSQ01459 385 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 TMEM214Q6NUQ4 689 aaKnown RBP14.73□□□□□ -0.05
CCNF-201ENST00000293968 GALNT18Q6P9A2 607 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 HASPINQ8TF76 798 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 TWIST2Q8WVJ9 160 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 EMID1Q96A84 441 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms