RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ADSLP30566 484 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 PTGIRP43119 386 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 CERCAMQ5T4B2 595 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 PHC3Q8NDX5 983 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 TM6SF2Q9BZW4 377 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 AGO3Q9H9G7 860 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 SHOX2O60902 331 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 CYP7B1O75881 506 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 LAG3P18627 525 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 ZNHIT3Q15649 155 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 NRF1Q16656 503 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 MPPE1Q53F39 396 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 HECTD2Q5U5R9 776 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 RSBN1Q5VWQ0 802 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 DNAJB14Q8TBM8 379 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 WDR60Q8WVS4 1066 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 RHOBTB2Q9BYZ6 727 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 PNPOQ9NVS9 261 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 CLN6Q9NWW5 311 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 ABLIM1O14639 778 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 DUSP11O75319 330 aaKnown RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 IPO13O94829 963 aaKnown RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 NDST3O95803 873 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 TRIM40Q6P9F5 258 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 C6orf62Q9GZU0 229 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 RERGLQ9H628 205 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 BRD9Q9H8M2 597 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 MAPKAPK2P49137 400 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 COX10Q12887 443 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 ITGA7Q13683 1181 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 NPY5RQ15761 445 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 CES5AQ6NT32 575 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 APTXQ7Z2E3 356 aaKnown RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 IKZF4Q9H2S9 585 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 CCNB1IP1Q9NPC3 277 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 KCTD5Q9NXV2 234 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 COL20A1Q9P218 1284 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 E9PAM4 449 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 ENTPD5O75356 428 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 LYPLA1O75608 230 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 CHRNB2P17787 502 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 NDST2P52849 883 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 LIMK2P53671 638 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 PEX6Q13608 980 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 C16orf72Q14CZ0 275 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 SHROOM1Q2M3G4 852 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 FNBP1LQ5T0N5 605 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 ZYG11AQ6WRX3 759 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 MARK2Q7KZI7 788 aaKnown RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 SLC25A51Q9H1U9 297 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 BTRCQ9Y297 605 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 PRMT5O14744 637 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 NRP2O60462 931 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 PIGRP01833 764 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 PKMP14618 531 aaKnown RBP12.81□□□□□ -0.36
PTCD1-201ENST00000292478 GLUD2P49448 558 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 DGKKQ5KSL6 1271 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 GCNT7Q6ZNI0 430 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 NEK10Q6ZWH5 1172 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 TBC1D21Q8IYX1 336 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 TLCD1Q96CP7 247 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 GMPPBQ9Y5P6 360 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 SESN1Q9Y6P5 492 aa12.81□□□□□ -0.36
PTCD1-201ENST00000292478 RBM47A0AV96 593 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 C2CD4BA6NLJ0 364 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 GPR25O00155 361 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 LIN7AO14910 233 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 HNRNPLP14866 589 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 FEN1P39748 380 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ADCY4Q8NFM4 1077 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 OR8D1Q8WZ84 308 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 HDHD2Q9H0R4 259 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 TBC1D14Q9P2M4 693 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CRNNQ9UBG3 495 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 MRPL42Q9Y6G3 142 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 MATN3O15232 486 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 SELPP16109 830 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 KLF10Q13118 480 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 MZT2AQ6P582 158 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 DET1Q7L5Y6 550 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 MECRQ9BV79 373 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 GRIP2Q9C0E4 1043 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 SIX2Q9NPC8 291 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 FFAR3O14843 346 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms