RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 NENFQ9UMX5 172 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 PCDHGC4Q9Y5F7 938 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 DGKBQ9Y6T7 804 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 SERPING1P05155 500 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 CYP1A2P05177 515 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 CTSEP14091 401 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 TRIM23P36406 574 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 TRAF2Q12933 501 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 PIGHQ14442 188 aaPredicted RBP25.31■■□□□ 1.64
U2AF1-201ENST00000291552 CNGA3Q16281 694 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 ESRP1Q6NXG1 681 aaKnown RBP25.31■■□□□ 1.64
U2AF1-201ENST00000291552 IGF2-ASQ6U949 168 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 SFTPA2Q8IWL1 248 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 LSMEM2Q8N112 164 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 ZNF248Q8NDW4 579 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 CCDC74AQ96AQ1 378 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 FCRL3Q96P31 734 aaPredicted RBP25.31■■□□□ 1.64
U2AF1-201ENST00000291552 NUDCD1Q96RS6 583 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 LGMNQ99538 433 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 LGR4Q9BXB1 951 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 NOD2Q9HC29 1040 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 MRPL40Q9NQ50 206 aaKnown RBP25.31■■□□□ 1.64
U2AF1-201ENST00000291552 GPR34Q9UPC5 381 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 DOLKQ9UPQ8 538 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 AHCTF1Q8WYP5 2266 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 CFAP46Q8IYW2 2715 aa25.31■■□□□ 1.64
U2AF1-201ENST00000291552 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.3■■□□□ 1.64
U2AF1-201ENST00000291552 SOCS5O75159 536 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 IL4RP24394 825 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 HSPA9P38646 679 aaKnown RBP25.3■■□□□ 1.64
U2AF1-201ENST00000291552 ERVPABLB-1P60509 514 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 POLR2LP62875 67 aaKnown RBP25.3■■□□□ 1.64
U2AF1-201ENST00000291552 ZBED6P86452 979 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 PTPRRQ15256 657 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 ATPAF2Q8N5M1 289 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 ATL2Q8NHH9 583 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 UBL7Q96S82 380 aaPredicted RBP25.3■■□□□ 1.64
U2AF1-201ENST00000291552 CAPN11Q9UMQ6 739 aa25.3■■□□□ 1.64
U2AF1-201ENST00000291552 BZW2Q9Y6E2 419 aaKnown RBP25.3■■□□□ 1.64
U2AF1-201ENST00000291552 ZFC3H1O60293 1989 aaKnown RBP25.3■■□□□ 1.64
U2AF1-201ENST00000291552 CPP00450 1065 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 GYPCP04921 128 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 CD48P09326 243 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 LHCGRP22888 699 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 UBASH3AP57075 661 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 MAXP61244 160 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 MMRN1Q13201 1228 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 GKN2Q86XP6 184 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 SDR16C5Q8N3Y7 309 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 PAF1Q8N7H5 531 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 OR56A4Q8NGH8 313 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 FAM71BQ8TC56 605 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 CPLX3Q8WVH0 158 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 SYNDIG1Q9H7V2 258 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 IP6K2Q9UHH9 426 aa25.29■■□□□ 1.64
U2AF1-201ENST00000291552 CACNB4O00305 520 aaPredicted RBP25.28■■□□□ 1.64
U2AF1-201ENST00000291552 TNFP01375 233 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 HOXC4P09017 264 aaPredicted RBP25.28■■□□□ 1.64
U2AF1-201ENST00000291552 ARSEP51690 589 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 SPIDRQ14159 915 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 ACOX1Q15067 660 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 PNCKQ6P2M8 343 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 B3GNT8Q7Z7M8 397 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 CBARPQ8N350 705 aaPredicted RBP25.28■■□□□ 1.64
U2AF1-201ENST00000291552 GPR156Q8NFN8 814 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 SCG3Q8WXD2 468 aaKnown RBP25.28■■□□□ 1.64
U2AF1-201ENST00000291552 GRAMD1AQ96CP6 724 aa25.28■■□□□ 1.64
U2AF1-201ENST00000291552 A0A1W2PQM1 296 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 MFSD11O43934 449 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 HEXIM1O94992 359 aaKnown RBP25.27■■□□□ 1.64
U2AF1-201ENST00000291552 VIPR1P32241 457 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 CDH6P55285 790 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 SKOR1P84550 965 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 HSD11B1LQ7Z5J1 315 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 CCL4L1Q8NHW4 92 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 WDR48Q8TAF3 677 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 PDCD6IPQ8WUM4 868 aaKnown RBP25.27■■□□□ 1.64
U2AF1-201ENST00000291552 NUS1Q96E22 293 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 SLC46A1Q96NT5 459 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 TMEM168Q9H0V1 697 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 WDR26Q9H7D7 661 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 THSD1Q9NS62 852 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 PCDHGA8Q9Y5G5 932 aa25.27■■□□□ 1.64
U2AF1-201ENST00000291552 HELZ2Q9BYK8 2649 aaKnown RBP25.26■■□□□ 1.63
U2AF1-201ENST00000291552 NPIPB15A6NHN6 443 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-201ENST00000291552 TNFRSF10CO14798 259 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 NOBOXO60393 691 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 SERPINB6P35237 376 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 MMP13P45452 471 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 CCL7P80098 99 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 IHHQ14623 411 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 ATP13A4Q4VNC1 1196 aa25.26■■□□□ 1.63
U2AF1-201ENST00000291552 ALKBH5Q6P6C2 394 aaKnown RBP25.26■■□□□ 1.63
U2AF1-201ENST00000291552 MCCC1Q96RQ3 725 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-201ENST00000291552 A0A0U1RQS6 177 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 CDRT15L2A8MXV6 281 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 D6RAR5 112 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 PGLSO95336 258 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 ETV3P41162 512 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 TPM4P67936 248 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms