RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 RALGPS1Q5JS13 557 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 KCTD16Q68DU8 428 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 NCBP2-AS2Q69YL0 99 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 H2AFVQ71UI9 128 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 EFL1Q7Z2Z2 1120 aaKnown RBP10.5□□□□□ -0.73
SNF8-201ENST00000290330 RD3Q7Z3Z2 195 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 LRRC49Q8IUZ0 686 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 SLC35F3Q8IY50 421 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 FSTL5Q8N475 847 aaPredicted RBP10.5□□□□□ -0.73
SNF8-201ENST00000290330 TEX26Q8N6G2 289 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 ATL2Q8NHH9 583 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 PCDH19Q8TAB3 1148 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 PDCD6IPQ8WUM4 868 aaKnown RBP10.5□□□□□ -0.73
SNF8-201ENST00000290330 NSMCE1Q8WV22 266 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 CTNNBL1Q8WYA6 563 aaPredicted RBP10.5□□□□□ -0.73
SNF8-201ENST00000290330 FUBP1Q96AE4 644 aaKnown RBP10.5□□□□□ -0.73
SNF8-201ENST00000290330 WDR92Q96MX6 357 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 DEPDC7Q96QD5 511 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 UVRAGQ9P2Y5 699 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 KLQ9UEF7 1012 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 DGKBQ9Y6T7 804 aa10.5□□□□□ -0.73
SNF8-201ENST00000290330 ZZEF1O43149 2961 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 SSU72P8A0A1W2PR75 194 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 TMEM202A6NGA9 273 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 CACNB4O00305 520 aaPredicted RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 MFSD11O43934 449 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 BRINP1O60477 761 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 CSO75390 466 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 CPP00450 1065 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 ALPIP09923 528 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 CTSEP14091 401 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 GJC1P36383 396 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 EIF2S3P41091 472 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 TERF1P54274 439 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 TAS2R40P59535 323 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 KIAA1024LP59773 190 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 GALNT2Q10471 571 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 TBX2Q13207 712 aaPredicted RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 ACOX1Q15067 660 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PAFAH1B3Q15102 231 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 PDK2Q15119 407 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 CNGA3Q16281 694 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 ISXQ2M1V0 245 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 ANKRD20A8PQ5CZ79 823 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 DNTTIP2Q5QJE6 756 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 PERM1Q5SV97 790 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 PNCKQ6P2M8 343 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 LVRNQ6Q4G3 990 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PDZD3Q86UT5 571 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 CNGA4Q8IV77 575 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PELI3Q8N2H9 469 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 CBARPQ8N350 705 aaPredicted RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 SDR16C5Q8N3Y7 309 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 KCTD6Q8NC69 237 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 OR56A4Q8NGH8 313 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 TPCN2Q8NHX9 752 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 SCG3Q8WXD2 468 aaKnown RBP10.49□□□□□ -0.73
SNF8-201ENST00000290330 OR1E3Q8WZA6 343 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 GLMNQ92990 594 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 NAT6Q93015 286 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PDXPQ96GD0 296 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 COQ10AQ96MF6 247 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PANX2Q96RD6 677 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 ZNF670Q9BS34 389 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 LGR4Q9BXB1 951 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 FGF22Q9HCT0 170 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PADI4Q9UM07 663 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 PHTF1Q9UMS5 762 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 DOLKQ9UPQ8 538 aa10.49□□□□□ -0.73
SNF8-201ENST00000290330 GOLGA6L9A6NEM1 432 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 NPIPB15A6NHN6 443 aaPredicted RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 AKR1B15C9JRZ8 316 aaPredicted RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 TNFRSF10CO14798 259 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MATN3O15232 486 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 CASC3O15234 703 aaKnown RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 AKR1B10O60218 316 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 USP12O75317 370 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 HEXIM1O94992 359 aaKnown RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 PGLSO95336 258 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MAP3K6O95382 1288 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 TNFP01375 233 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MPOP05164 745 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 KRT7P08729 469 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 HOXC4P09017 264 aaPredicted RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 TMEM253P0C7T8 217 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 LHCGRP22888 699 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 KELP23276 732 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 VIPR1P32241 457 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 CCZ1BP86790 482 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 CCZ1P86791 482 aaPredicted RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 PTPRRQ15256 657 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 TCEA2Q15560 299 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 ARMC12Q5T9G4 340 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 CRTC1Q6UUV9 634 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 GKN2Q86XP6 184 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MAP7D3Q8IWC1 876 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms