RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 SPASTQ9UBP0 616 aa6.96□□□□□ -1.3
VPS8-201ENST00000287546 ARIH1Q9Y4X5 557 aaPredicted RBP6.96□□□□□ -1.3
VPS8-201ENST00000287546 PLXNA1Q9UIW2 1896 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 H3BM21 787 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 MSI1O43347 362 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 CLEC3AO75596 197 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SOAT2O75908 522 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 KRT8P05787 483 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 PBX3P40426 434 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 MASP1P48740 699 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 RAB10P61026 200 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 RIPK1Q13546 671 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 FAM46CQ5VWP2 391 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 FAM45BPQ6NSW5 357 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 VASH1Q7L8A9 365 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 RBM23Q86U06 439 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 CHPFQ8IZ52 775 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 ATAD1Q8NBU5 361 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 KLHDC9Q8NEP7 349 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 B4GALNT2Q8NHY0 566 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 FAM45AQ8TCE6 357 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 ATOH1Q92858 354 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 OSBPL7Q9BZF2 842 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TRIM15Q9C019 465 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 DCLRE1BQ9H816 532 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 PIH1D1Q9NWS0 290 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 NUDT5Q9UKK9 219 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 FBXO5Q9UKT4 447 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TMCC3Q9ULS5 477 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TMCO1Q9UM00 188 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 ZNF510Q9Y2H8 683 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 LAMA2P24043 3122 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 RHOBTB1O94844 696 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 OR4Q2P0C623 313 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TPBGLP0DKB5 382 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CTGFP29279 349 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SERPINB3P29508 390 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CARTPTQ16568 116 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TEDDM1Q5T9Z0 273 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 STEAP4Q687X5 459 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 KIAA0930Q6ICG6 404 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 PIWIL4Q7Z3Z4 852 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 OVCA2Q8WZ82 227 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 MIOSQ9NXC5 875 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CLDND1Q9NY35 253 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TCAF1Q9Y4C2 921 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 PITPNM1O00562 1244 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 IFNA16P05015 189 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 ERCC1P07992 297 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 C6P13671 934 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 VAV1P15498 845 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 IL4RP24394 825 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CD86P42081 329 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 ABL2P42684 1182 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 RHOAP61586 193 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CNTN1Q12860 1018 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 DCTN2Q13561 401 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 TAF13Q15543 124 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TRMT5Q32P41 509 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 DGKKQ5KSL6 1271 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SNAP47Q5SQN1 464 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 MSANTD2Q6P1R3 559 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 PSRC1Q6PGN9 363 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 AHI1Q8N157 1196 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 STK40Q8N2I9 435 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SNX31Q8N9S9 440 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 HJURPQ8NCD3 748 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 SCAMP5Q8TAC9 235 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SERAC1Q96JX3 654 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 MRPL57Q9BQC6 102 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 MRM3Q9HC36 420 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 ASAH2Q9NR71 780 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SUCOQ9UBS9 1254 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 VPS28Q9UK41 221 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 DNM1LO00429 736 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 KPNA3O00505 521 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 KERAO60938 352 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 BEST1O76090 585 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 ATP6V1G2O95670 118 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TACR2P21452 398 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 FOXN2P32314 431 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CDH4P55283 916 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 PER3P56645 1201 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 RING1Q06587 406 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 DUSP4Q13115 394 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 CUL3Q13618 768 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 DSC3Q14574 896 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 RFTN1Q14699 578 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 FBXL19Q6PCT2 694 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 SERPINA13PQ6UXR4 307 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TRMT11Q7Z4G4 463 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 CARNMT1Q8N4J0 409 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 TDRD5Q8NAT2 981 aaKnown RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 NT5C3BQ969T7 300 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 C2orf49Q9BVC5 232 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 ACE2Q9BYF1 805 aaPredicted RBP6.95□□□□□ -1.3
VPS8-201ENST00000287546 LRMDAQ9H2I8 198 aa6.95□□□□□ -1.3
VPS8-201ENST00000287546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms