RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FAXCQ5TGI0 409 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ANKRD20A1Q5TYW2 823 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ANKRD20A3Q5VUR7 823 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ALS2CLQ60I27 953 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ALG1LQ6GMV1 187 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 RAET1GQ6H3X3 334 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 LIPIQ6XZB0 460 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 KYAT3Q6YP21 454 aaKnown RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 REXO1L1PQ8IX06 675 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 MFSD2AQ8NA29 543 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 TMEM145Q8NBT3 493 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 DENND6BQ8NEG7 585 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 C1orf216Q8TAB5 229 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 CCHCR1Q8TD31 782 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 UBE2Q2Q8WVN8 375 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 PIH1D2Q8WWB5 315 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 MAIP1Q8WWC4 291 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 VOPP1Q96AW1 172 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 SPATA13Q96N96 652 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ELF4Q99607 663 aaPredicted RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 APOL2Q9BQE5 337 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 RTKNQ9BST9 563 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 TMEM121Q9BTD3 319 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 MLPHQ9BV36 600 aaPredicted RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 FICDQ9BVA6 458 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 C1QTNF2Q9BXJ5 285 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 TLR10Q9BXR5 811 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 GPR63Q9BZJ6 419 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 GBA3Q9H227 469 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 SLC32A1Q9H598 525 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 MBNL1Q9NR56 388 aaKnown RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 TM7SF3Q9NS93 570 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 DNAJC28Q9NX36 388 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 FAM153AQ9UHL3 310 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 CD84Q9UIB8 345 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 DNPEPQ9ULA0 475 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 SHOC2Q9UQ13 582 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 OR1A2Q9Y585 309 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 THADAQ6YHU6 1953 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 A0A1W2PR77 199 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CFAP69A5D8W1 941 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 E7EVH7 732 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 H3BM21 787 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CACNB4O00305 520 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 CDX4O14627 284 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 SLC30A4O14863 429 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 SCAMP1O15126 338 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 LIASO43766 372 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 FZD6O60353 706 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 ANXA9O76027 345 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CLDN7O95471 211 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 NDST3O95803 873 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 C1SP09871 688 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 ZNF30P17039 623 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 HTR1BP28222 390 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CD68P34810 354 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 CTSKP43235 329 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CHRNA4P43681 627 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 GPR1P46091 355 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 NOVA1P51513 510 aaKnown RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 LIMK1P53667 647 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 TERF1P54274 439 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 GDF10P55107 478 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 WNT3AP56704 352 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 RPL26P61254 145 aaKnown RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 BNC1Q01954 994 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 OVGP1Q12889 678 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 KLF1Q13351 362 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 MPP3Q13368 585 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 MTM1Q13496 603 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 PTK2BQ14289 1009 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 SPARCL1Q14515 664 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 INPP5AQ14642 412 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 PUM1Q14671 1186 aaKnown RBP eCLIP6.54□□□□□ -1.36
CD44-204ENST00000279452 SUZ12Q15022 739 aaKnown RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 QPCTQ16769 361 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 WSCD2Q2TBF2 565 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 P3H1Q32P28 736 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 INAVAQ3KP66 663 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 HS1BP3Q53T59 392 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CCDC157Q569K6 752 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 DOK6Q6PKX4 331 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 CRTC1Q6UUV9 634 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 ENPP7Q6UWV6 458 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 Q6ZVL8 140 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 LYSMD3Q7Z3D4 306 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 DGLUCYQ7Z3D6 616 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 RD3Q7Z3Z2 195 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 GLT6D1Q7Z4J2 308 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 HSD11B1LQ7Z5J1 315 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 ABI3BPQ7Z7G0 1075 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 IQCHQ86VS3 1027 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 PARGQ86W56 976 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 GATAD2AQ86YP4 633 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 NAXDQ8IW45 347 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 SLC22A18ASQ8N1D0 253 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 C17orf53Q8N3J3 647 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 OXR1Q8N573 874 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 PLA2G15Q8NCC3 412 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms