RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 GPR27Q9NS67 375 aa12.41□□□□□ -0.42
MRPS28-201ENST00000276585 ETNK2Q9NVF9 386 aa12.41□□□□□ -0.42
MRPS28-201ENST00000276585 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
MRPS28-201ENST00000276585 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
MRPS28-201ENST00000276585 PISDQ9UG56 409 aa12.41□□□□□ -0.42
MRPS28-201ENST00000276585 HPCAL4Q9UM19 191 aa12.41□□□□□ -0.42
MRPS28-201ENST00000276585 LUC7L2Q9Y383 392 aaKnown RBP12.41□□□□□ -0.42
MRPS28-201ENST00000276585 C16orf96A6NNT2 1141 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 KRIT1O00522 736 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 AREL1O15033 823 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 MUSKO15146 869 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 RAD51BO15315 384 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 SLC31A1O15431 190 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 PRPSAP2O60256 369 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 VPS4BO75351 444 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 RNF8O76064 485 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 EIF4A3P38919 411 aaKnown RBP12.4□□□□□ -0.42
MRPS28-201ENST00000276585 PAPOLAP51003 745 aaKnown RBP12.4□□□□□ -0.42
MRPS28-201ENST00000276585 SNRPD1P62314 119 aaKnown RBP12.4□□□□□ -0.42
MRPS28-201ENST00000276585 NR0B2Q15466 257 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 ZNF805Q5CZA5 627 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 PPP6R3Q5H9R7 873 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-201ENST00000276585 LRRC73Q5JTD7 316 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 PERM1Q5SV97 790 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 ABI3BPQ7Z7G0 1075 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 SLC22A18ASQ8N1D0 253 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 WDR48Q8TAF3 677 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 CASKIN2Q8WXE0 1202 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 MOCOSQ96EN8 888 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 NSMCE3Q96MG7 304 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 GDAP1L1Q96MZ0 367 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 KLHL32Q96NJ5 620 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 NUP85Q9BW27 656 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 STRADBQ9C0K7 418 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.42
MRPS28-201ENST00000276585 DYRK4Q9NR20 520 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 DNAJC28Q9NX36 388 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 VPS4AQ9UN37 437 aa12.4□□□□□ -0.42
MRPS28-201ENST00000276585 SPENQ96T58 3664 aaKnown RBP12.4□□□□□ -0.42
MRPS28-201ENST00000276585 TSPAN11A1L157 253 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 EME2A4GXA9 379 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 CASC3O15234 703 aaKnown RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 POP4O95707 220 aaKnown RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 RNF224P0DH78 156 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 RARAP10276 462 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 DESP17661 470 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 ITIH2P19823 946 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 HNRNPA2B1P22626 353 aaKnown RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 GNLYP22749 145 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 HCAR3P49019 387 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 MLLT10P55197 1068 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 CLDN2P57739 230 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 RHOAP61586 193 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 HNRNPKP61978 463 aaKnown RBP eCLIP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 TPRG1LQ5T0D9 272 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 KIAA1161Q6NSJ0 714 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 MAMDC2Q7Z304 686 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 POLNQ7Z5Q5 900 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 ZSWIM9Q86XI8 627 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 RYBPQ8N488 228 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 OR13H1Q8NG92 308 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 BMFQ96LC9 184 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 OSBPL1AQ9BXW6 950 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 PCDH18Q9HCL0 1135 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 UBA2Q9UBT2 640 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-201ENST00000276585 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
MRPS28-201ENST00000276585 MED13Q9UHV7 2174 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 POM121BA6NF01 834 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 AGRPO00253 132 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 NVLO15381 856 aaKnown RBP12.38□□□□□ -0.43
MRPS28-201ENST00000276585 BUB1BO60566 1050 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-201ENST00000276585 PCDH8O95206 1070 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 PIGNO95427 931 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 IGSF6O95976 241 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 PEX11BO96011 259 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 ARSEP51690 589 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 PIGHQ14442 188 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-201ENST00000276585 CCDC122Q5T0U0 273 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 SPECC1LQ69YQ0 1117 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 GDPD4Q6W3E5 623 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 B3GNT8Q7Z7M8 397 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 ZNF354CQ86Y25 554 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 RNF214Q8ND24 703 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 TEKT4Q8WW24 435 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 RAB7BQ96AH8 199 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 CSPG4P5Q96PW8 444 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 C1QTNF2Q9BXJ5 285 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 SLC12A9Q9BXP2 914 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms