RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ILF2Q12905 390 aaKnown RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 GRM2Q14416 872 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ZNF470Q6ECI4 717 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 DENND6AQ8IWF6 608 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ANKRD42Q8N9B4 389 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 OR6P1Q8NGX9 317 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 MYLIPQ8WY64 445 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 CDKN2AIPNLQ96HQ2 116 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 VPS39Q96JC1 886 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 SMIM14Q96QK8 99 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 GPR22Q99680 433 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 PHTF1Q9UMS5 762 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 PPIL1Q9Y3C6 166 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 TTC34A8MYJ7 566 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.14□□□□□ -0.15
SS18-201ENST00000269137 PRRT4C9JH25 899 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 OPRD1P41143 372 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 LEPRP48357 1165 aaKnown RBP14.14□□□□□ -0.15
SS18-201ENST00000269137 NEK3P51956 506 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 WDR4P57081 412 aaKnown RBP14.14□□□□□ -0.15
SS18-201ENST00000269137 MESP2Q0VG99 397 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 CTBP1Q13363 440 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 CILP2Q8IUL8 1156 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 DCLK2Q8N568 766 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 OR4K2Q8NGD2 314 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 SCG3Q8WXD2 468 aaKnown RBP14.14□□□□□ -0.15
SS18-201ENST00000269137 LYSMD1Q96S90 227 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 TRMT61BQ9BVS5 477 aaKnown RBP14.14□□□□□ -0.15
SS18-201ENST00000269137 CD207Q9UJ71 328 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 PLA2G4CQ9UP65 541 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 ZNF711Q9Y462 761 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 KIAA1549LQ6ZVL6 1849 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
SS18-201ENST00000269137 CCDC162PA2VCL2 907 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 ANHXE9PGG2 379 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 ARNTLO00327 626 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 COPEO14579 308 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 BUD23O43709 281 aaKnown RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 ASMTLO95671 621 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 IGFBP4P22692 258 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 GDI1P31150 447 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 HMGCLP35914 325 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 CD151P48509 253 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 SERPINB8P50452 374 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 ST8SIA6P61647 398 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 MPP1Q00013 466 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 PTPRCAPQ14761 206 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 TERB1Q8NA31 727 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 CHST14Q8NCH0 376 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 OR4L1Q8NH43 312 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 TCP10LQ8TDR4 215 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 NXPE3Q969Y0 559 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 LRIG1Q96JA1 1093 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 HEPHQ9BQS7 1158 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 ZDHHC6Q9H6R6 413 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 GTSE1Q9NYZ3 720 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 MTO1Q9Y2Z2 717 aaKnown RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 USP15Q9Y4E8 981 aaPredicted RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 CAPN8A6NHC0 703 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 H7C0S8 307 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 CCL22O00626 93 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 TPP1O14773 563 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 STX7O15400 261 aaKnown RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 CD3EAPO15446 510 aaKnown RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 BNIP3LO60238 219 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 GOT2P00505 430 aaKnown RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 CRHR1P34998 444 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 CCT5P48643 541 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 HTR4Q13639 388 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 CDKN3Q16667 212 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 ITPRIPL2Q3MIP1 535 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 PREPLQ4J6C6 727 aaPredicted RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 MRNIPQ6NTE8 343 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 AFTPHQ6ULP2 937 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 GDPD4Q6W3E5 623 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 PTAR1Q7Z6K3 402 aaPredicted RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 ZSWIM9Q86XI8 627 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 NDUFAF2Q8N183 169 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 MGARPQ8TDB4 240 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 SCRN2Q96FV2 425 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 CABS1Q96KC9 395 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 MCCC1Q96RQ3 725 aaPredicted RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 RPP25Q9BUL9 199 aaKnown RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 SUDS3Q9H7L9 328 aaPredicted RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 IL17CQ9P0M4 197 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 COLQQ9Y215 455 aaPredicted RBP14.13□□□□□ -0.15
SS18-201ENST00000269137 WASF2Q9Y6W5 498 aa14.13□□□□□ -0.15
SS18-201ENST00000269137 BPTFQ12830 3046 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 S1PR4O95977 384 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 UGT2B4P06133 528 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 ALPIP09923 528 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 CTPS1P17812 591 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 OGNP20774 298 aaKnown RBP14.12□□□□□ -0.15
SS18-201ENST00000269137 TYK2P29597 1187 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 HNF1BP35680 557 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 CSRP3P50461 194 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 POLR2LP62875 67 aaKnown RBP14.12□□□□□ -0.15
SS18-201ENST00000269137 TMPRSS15P98073 1019 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 IL9RQ01113 521 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms