RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 MTERF3Q96E29 417 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 ZC4H2Q9NQZ6 224 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 TLR8Q9NR97 1041 aaKnown RBP16.65■□□□□ 0.26
SCAP-201ENST00000265565 UBA2Q9UBT2 640 aaPredicted RBP16.65■□□□□ 0.26
SCAP-201ENST00000265565 CD3EAPO15446 510 aaKnown RBP16.65■□□□□ 0.26
SCAP-201ENST00000265565 MED26O95402 600 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 SMIM10L2AP0DMW4 78 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 SMIM10L2BP0DMW5 78 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 CYP4B1P13584 511 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 MRPL28Q13084 256 aaKnown RBP16.65■□□□□ 0.26
SCAP-201ENST00000265565 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 RAB6CQ53S08 254 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 SVOPQ8N4V2 548 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 NKAPQ8N5F7 415 aaKnown RBP16.65■□□□□ 0.26
SCAP-201ENST00000265565 SMAD5Q99717 465 aaKnown RBP16.65■□□□□ 0.26
SCAP-201ENST00000265565 ADI1Q9BV57 179 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 FTHL17Q9BXU8 183 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 RAB6CQ9H0N0 254 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 OXSMQ9NWU1 459 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 PPP2R3BQ9Y5P8 575 aa16.65■□□□□ 0.26
SCAP-201ENST00000265565 NRCAMQ92823 1304 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 PPEF2O14830 753 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 PLSCR1O15162 318 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 NADKO95544 446 aaPredicted RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 ADSLP30566 484 aaPredicted RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 TMEM214Q6NUQ4 689 aaKnown RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 CPSF7Q8N684 471 aaKnown RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 TWIST2Q8WVJ9 160 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 PLEKHA8Q96JA3 519 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 PCDHB5Q9Y5E4 795 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 COPG1Q9Y678 874 aaKnown RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 HNRNPCL2B2RXH8 293 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 ASNA1O43681 348 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 DBTP11182 482 aaKnown RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 JAK1P23458 1154 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 CDK18Q07002 472 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 BOP1Q14137 746 aaKnown RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 CNSTQ6PJW8 725 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 NDEL1Q9GZM8 345 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 SIX4Q9UIU6 781 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 FZD10Q9ULW2 581 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 CNTN6Q9UQ52 1028 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 E7ENX8 843 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 E7ESA3 106 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 H3BNX3 289 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 RGS14O43566 566 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 RECQL5O94762 991 aaPredicted RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 MAPK1P28482 360 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 PGGT1BP53609 377 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 LIPEQ05469 1076 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 PPIL2Q13356 520 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 TMEM63BQ5T3F8 832 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 C11orf96Q7Z7L8 435 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 GPR152Q8TDT2 470 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 TRNAU1APQ9NX07 287 aaKnown RBP16.64■□□□□ 0.25
SCAP-201ENST00000265565 ADAMTS6Q9UKP5 1117 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 SQORQ9Y6N5 450 aa16.64■□□□□ 0.25
SCAP-201ENST00000265565 FGF3P11487 239 aaPredicted RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 ZNF252P-AS1Q0IIN9 211 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 MAD2L1Q13257 205 aaPredicted RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 RPS27LQ71UM5 84 aaKnown RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 TRIM69Q86WT6 500 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 ZNF540Q8NDQ6 660 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 TEKT5Q96M29 485 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 PNPLA8Q9NP80 782 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 SMPD3Q9NY59 655 aaPredicted RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 IGSF9Q9P2J2 1179 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 MLYCDO95822 493 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 RPS9P46781 194 aaKnown RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 CARTPTQ16568 116 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 CPSF6Q16630 551 aaKnown RBP eCLIP16.63■□□□□ 0.25
SCAP-201ENST00000265565 PAGE2BQ5JRK9 111 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 GALNT18Q6P9A2 607 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 BBS7Q8IWZ6 715 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 POC5Q8NA72 575 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 SELENOMQ8WWX9 145 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 STRA6Q9BX79 667 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 EPB41L1Q9H4G0 881 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 GMPPBQ9Y5P6 360 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 ATP6V1G1O75348 118 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 STAU1O95793 577 aaKnown RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 ANXA6P08133 673 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
SCAP-201ENST00000265565 SPANXN2Q5MJ10 180 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 DCLRE1AQ6PJP8 1040 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 TMEM132CQ8N3T6 1108 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 OR9I1Q8NGQ6 314 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 OR4L1Q8NH43 312 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 ADAM2Q99965 735 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 OSBPL6Q9BZF3 934 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 ZYG11BQ9C0D3 744 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 SH3BP1Q9Y3L3 701 aa16.63■□□□□ 0.25
SCAP-201ENST00000265565 A0A088AWK7 358 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms