RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CNGA3Q16281 694 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 UGP2Q16851 508 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 TSTD2Q5T7W7 516 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 STEAP4Q687X5 459 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 CRTC1Q6UUV9 634 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 RFLNAQ6ZTI6 216 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 CEP128Q6ZU80 1094 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 HDXQ7Z353 690 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 GLT6D1Q7Z4J2 308 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 TMEM135Q86UB9 458 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 TTC30BQ8N4P2 665 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 BRSK1Q8TDC3 778 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 MSANTD3Q96H12 275 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 DNAJC1Q96KC8 554 aaKnown RBP9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 ZIM3Q96PE6 472 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 PHACTR1Q9C0D0 580 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 RSPH9Q9H1X1 276 aaPredicted RBP9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 TBC1D17Q9HA65 648 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 CD248Q9HCU0 757 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 LTB4R2Q9NPC1 389 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 PCDH12Q9NPG4 1184 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 SMYD2Q9NRG4 433 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 B4GALT6Q9UBX8 382 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 SERGEFQ9UGK8 458 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 FNDC3AQ9Y2H6 1198 aaKnown RBP9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 ZNF711Q9Y462 761 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 NFS1Q9Y697 457 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 C1orf232A0A0U1RR37 186 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TSPAN11A1L157 253 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MAGEB16A2A368 324 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 HEATR9A2RTY3 570 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MROH6A6NGR9 719 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UPK3BL1B0FP48 263 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UPK3BL2E5RIL1 263 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 AP3B1O00203 1094 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SPINT1O43278 529 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A9O60656 530 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 VAPBO95292 243 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 C1QAP02745 245 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 POLBP06746 335 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 LHCGRP22888 699 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 RPL26P61254 145 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 RPS14P62263 151 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 CNTN1Q12860 1018 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 STARD3Q14849 445 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TAF1AQ15573 450 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 CST6Q15828 149 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 CDKN3Q16667 212 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 FBXO43Q4G163 708 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 BRAT1Q6PJG6 821 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TRIM67Q6ZTA4 783 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TMPRSS6Q8IU80 811 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UBALD2Q8IYN6 164 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 IQCKQ8N0W5 287 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 AADATQ8N5Z0 425 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 OR4K2Q8NGD2 314 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 OR13J1Q8NGT2 312 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 GSDMBQ8TAX9 411 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SCRN2Q96FV2 425 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 LRIG1Q96JA1 1093 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TTC25Q96NG3 672 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 RANBP9Q96S59 729 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 OSBPL1AQ9BXW6 950 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 GPR63Q9BZJ6 419 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A7Q9HAW7 530 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A10Q9HAW8 530 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A8Q9HAW9 530 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MAGEE1Q9HCI5 957 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 CD93Q9NPY3 652 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 PPANQ9NQ55 473 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TREX1Q9NSU2 369 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 RABGEF1Q9UJ41 708 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MMP17Q9ULZ9 603 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 RPL26L1Q9UNX3 145 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 PPIL1Q9Y3C6 166 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM169AQ9Y6X4 670 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SCN8AQ9UQD0 1980 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 BDP1A6H8Y1 2624 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 A0A087WUV0 522 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 A0A1W2PP55 124 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 CAPN8A6NHC0 703 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 POC1B-GALNT4F8VUJ3 575 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MAP2K7O14733 419 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM155BO75949 473 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 USP1O94782 785 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 PDGFBP01127 241 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 PRSS56P0CW18 603 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 LPOP22079 712 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 XPAP23025 273 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 ITGB7P26010 798 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 ARNTP27540 789 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 DRD3P35462 400 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SLCO1A2P46721 670 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 ZNF140P52738 457 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 POLR2LP62875 67 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 ZXDAP98168 799 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 PTSQ03393 145 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 LONRF1Q17RB8 773 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 KBTBD12Q3ZCT8 623 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms