RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 E4F1Q66K89 784 aaPredicted RBP23.15■■□□□ 1.3
HMG20B-201ENST00000262949 FAM46DQ8NEK8 389 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 FUBP1Q96AE4 644 aaKnown RBP23.15■■□□□ 1.3
HMG20B-201ENST00000262949 PDXPQ96GD0 296 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 WDR26Q9H7D7 661 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.15■■□□□ 1.3
HMG20B-201ENST00000262949 NTN3O00634 580 aaPredicted RBP23.14■■□□□ 1.29
HMG20B-201ENST00000262949 SOCS5O75159 536 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 TNFSF15O95150 251 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 AMPD1P23109 780 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 EIF3IQ13347 325 aaKnown RBP23.14■■□□□ 1.29
HMG20B-201ENST00000262949 NR1I3Q14994 352 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 TSR1Q2NL82 804 aaKnown RBP23.14■■□□□ 1.29
HMG20B-201ENST00000262949 TAF1BQ53T94 588 aaPredicted RBP23.14■■□□□ 1.29
HMG20B-201ENST00000262949 FIGNQ5HY92 759 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 ARHGAP40Q5TG30 622 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 ATPAF2Q8N5M1 289 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.14■■□□□ 1.29
HMG20B-201ENST00000262949 B4GALT6Q9UBX8 382 aa23.14■■□□□ 1.29
HMG20B-201ENST00000262949 LRRK1Q38SD2 2015 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 BPTFQ12830 3046 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 TMEM202A6NGA9 273 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 CPP00450 1065 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 RPLP0P05388 317 aaKnown RBP23.13■■□□□ 1.29
HMG20B-201ENST00000262949 CYP2A6P11509 494 aaPredicted RBP23.13■■□□□ 1.29
HMG20B-201ENST00000262949 IL1R2P27930 398 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 TRIM23P36406 574 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 CCL7P80098 99 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 RHDQ02161 417 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 PNCKQ6P2M8 343 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 POLNQ7Z5Q5 900 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 OR1E3Q8WZA6 343 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 NUS1Q96E22 293 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 LIN37Q96GY3 246 aaPredicted RBP23.13■■□□□ 1.29
HMG20B-201ENST00000262949 TMEM74Q96NL1 305 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 CSPG4P5Q96PW8 444 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 NUDCD1Q96RS6 583 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 CPNE5Q9HCH3 593 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 EPB41L5Q9HCM4 733 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 CYP4F12Q9HCS2 524 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 FGF22Q9HCT0 170 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 IP6K2Q9UHH9 426 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 PCDHGC4Q9Y5F7 938 aa23.13■■□□□ 1.29
HMG20B-201ENST00000262949 A0A1W2PNU3 283 aaPredicted RBP23.12■■□□□ 1.29
HMG20B-201ENST00000262949 ERVH48-1M5A8F1 160 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 PRB1P04280 392 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 ITGA2BP08514 1039 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 KRT10P13645 584 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 GLB1P16278 677 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 INHBCP55103 352 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 KRT81Q14533 505 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 RALGPS1Q5JS13 557 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 MARC1Q5VT66 337 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 DENND2CQ68D51 928 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 TP53INP2Q8IXH6 220 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 GPR156Q8NFN8 814 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 SPOCK2Q92563 424 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 PRR11Q96HE9 360 aaPredicted RBP23.12■■□□□ 1.29
HMG20B-201ENST00000262949 LRRN3Q9H3W5 708 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 DPEP2Q9H4A9 486 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 MRPL40Q9NQ50 206 aaKnown RBP23.12■■□□□ 1.29
HMG20B-201ENST00000262949 PHPT1Q9NRX4 125 aaPredicted RBP23.12■■□□□ 1.29
HMG20B-201ENST00000262949 RABGEF1Q9UJ41 708 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 PHTF1Q9UMS5 762 aa23.12■■□□□ 1.29
HMG20B-201ENST00000262949 TTC24A2A3L6 582 aaPredicted RBP23.11■■□□□ 1.29
HMG20B-201ENST00000262949 CDRT15L2A8MXV6 281 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 D6RAR5 112 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 PLD2O14939 933 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 HTRA2O43464 458 aaPredicted RBP23.11■■□□□ 1.29
HMG20B-201ENST00000262949 RARAP10276 462 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 VIPR1P32241 457 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 SSR1P43307 286 aaKnown RBP23.11■■□□□ 1.29
HMG20B-201ENST00000262949 CDH6P55285 790 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 ARHGEF7Q14155 803 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 CCNJLQ8IV13 435 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 NDUFAF2Q8N183 169 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 FBXO39Q8N4B4 442 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 Q8N9G6 341 aaPredicted RBP23.11■■□□□ 1.29
HMG20B-201ENST00000262949 TEKT4Q8WW24 435 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 SYN2Q92777 582 aaPredicted RBP23.11■■□□□ 1.29
HMG20B-201ENST00000262949 TMEM168Q9H0V1 697 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 WDR70Q9NW82 654 aa23.11■■□□□ 1.29
HMG20B-201ENST00000262949 ANKRD36A6QL64 1941 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 A0A1W2PQJ5 194 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 PRSS38A1L453 326 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 GOLGA6CA6NDK9 693 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 GOLGA6BA6NDN3 693 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 CAPN8A6NHC0 703 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 B4DGG1 531 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 MAFKO60675 156 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 GOLGA6DP0CG33 693 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 MYCLP1P12525 358 aaPredicted RBP23.1■■□□□ 1.29
HMG20B-201ENST00000262949 PNLIPP16233 465 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 MMP13P45452 471 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 PDX1P52945 283 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 VAC14Q08AM6 782 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 IQCB1Q15051 598 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 NFKBIBQ15653 356 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 OGFOD3Q6PK18 319 aa23.1■■□□□ 1.29
HMG20B-201ENST00000262949 NYAP1Q6ZVC0 841 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms