RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 TNFSF9P41273 254 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 LGALS3BPQ08380 585 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 DLG2Q15700 870 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 FAXDC2Q96IV6 333 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ALG2Q9H553 416 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 IFT80Q9P2H3 777 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 SAMD4AQ9UPU9 718 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 TIMM13Q9Y5L4 95 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 WTIPA6NIX2 430 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 SLC28A1O00337 649 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 DHX15O43143 795 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 DNAJA2O60884 412 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 RNASEH1O60930 286 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ANXA5P08758 320 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ELP6Q0PNE2 266 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 CRY1Q16526 586 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 VPS26BQ4G0F5 336 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PAN2Q504Q3 1202 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PHF10Q8WUB8 498 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 HSPBAP1Q96EW2 488 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 CSPG4P5Q96PW8 444 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PEX16Q9Y5Y5 336 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 DCCP43146 1447 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 FAM240BA0A1B0GVZ2 78 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 NR2F6P10588 404 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 IGFBP5P24593 272 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ACLYP53396 1101 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 COPZ1P61923 177 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 MERTKQ12866 999 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 SIM2Q14190 667 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 STRADAQ7RTN6 431 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ADAMTSL2Q86TH1 951 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PACRGLQ8N7B6 248 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ZNF671Q8TAW3 534 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 YTHDF1Q9BYJ9 559 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 H7C0S8 307 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 TMEM63AO94886 807 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 SNHG28P0DPA3 235 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 CD86P42081 329 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ZNF157P51786 506 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PTPRNQ16849 979 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ZNF829Q3KNS6 432 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ZNF544Q6NX49 715 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 NXNL1Q96CM4 212 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 PPM1MQ96MI6 270 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 OR52E6Q96RD3 313 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ACO2Q99798 780 aaKnown RBP10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ELOVL4Q9GZR5 314 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 CDT1Q9H211 546 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ATP13A1Q9HD20 1204 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
CSNK1A1-201ENST00000261798 NDUFS2O75306 463 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 GCATO75600 419 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 FTH1P02794 183 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 CRATP43155 626 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 THOP1P52888 689 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 CSNK2BP67870 215 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 CAPSQ13938 189 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 HERC3Q15034 1050 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 XYLT1Q86Y38 959 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 SLC35B2Q8TB61 432 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 KAT8Q9H7Z6 458 aaKnown RBP10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 SP140LQ9H930 580 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 CORO2BQ9UQ03 480 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 C17orf102A2RUQ5 167 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 SSNA1O43805 119 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 ITGAXP20702 1163 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 TTPAP49638 278 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 CDK18Q07002 472 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 IL18R1Q13478 541 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 OVOS1Q6IE37 1185 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 RETSATQ6NUM9 610 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 ZCCHC8Q6NZY4 707 aaKnown RBP10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 CD101Q93033 1021 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 BHMTQ93088 406 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 ASB9Q96DX5 294 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 DHFRP00374 187 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 AKAP5P24588 427 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 IRF8Q02556 426 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 PPM1LQ5SGD2 360 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 FSTL4Q6MZW2 842 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 FAM131AQ6UXB0 335 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 C16orf62Q7Z3J2 963 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 DCAKDQ8WVC6 231 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 REPS1Q96D71 796 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 ITCHQ96J02 903 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 ITM2BQ9Y287 266 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 AQP12BA6NM10 295 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 RFXANKO14593 260 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 FFAR3O14843 346 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 GPR182O15218 404 aa10.84□□□□□ -0.67
CSNK1A1-201ENST00000261798 GPR42O15529 346 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms