RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 NSUN2Q08J23 767 aaKnown RBP eCLIP17.54■□□□□ 0.4
SRSF1-201ENST00000258962 FUT11Q495W5 492 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 C2orf27AQ580R0 203 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 HSP90AA5PQ58FG0 334 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 ATXN7L2Q5T6C5 722 aaPredicted RBP17.54■□□□□ 0.4
SRSF1-201ENST00000258962 RETSATQ6NUM9 610 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 NCEH1Q6PIU2 408 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 ANKRD42Q8N9B4 389 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 RPLP0P6Q8NHW5 317 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 EZH1Q92800 747 aaPredicted RBP17.54■□□□□ 0.4
SRSF1-201ENST00000258962 AGAP2Q99490 1192 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 INTS9Q9NV88 658 aaKnown RBP17.54■□□□□ 0.4
SRSF1-201ENST00000258962 MROH6A6NGR9 719 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 FAM47DPA6NHR8 397 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 CHURC1-FNTBB4DL54 471 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 GOLGA8RI6L899 631 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 KRT38O76015 456 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 PRKCGP05129 697 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 SP9P0CG40 484 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 CTSOP43234 321 aaPredicted RBP17.53■□□□□ 0.4
SRSF1-201ENST00000258962 MRPS21P82921 87 aaKnown RBP17.53■□□□□ 0.4
SRSF1-201ENST00000258962 SATB1Q01826 763 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 DMTNQ08495 405 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 ZNF528Q3MIS6 628 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 TSTD2Q5T7W7 516 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 PDPK2PQ6A1A2 396 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 MAML2Q8IZL2 1156 aaPredicted RBP17.53■□□□□ 0.4
SRSF1-201ENST00000258962 PHTF2Q8N3S3 785 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 TERB1Q8NA31 727 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 MGARPQ8TDB4 240 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 DENND1AQ8TEH3 1009 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 CPNE1Q99829 537 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 SLC2A11Q9BYW1 496 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 PRMT8Q9NR22 394 aaPredicted RBP17.53■□□□□ 0.4
SRSF1-201ENST00000258962 SMG5Q9UPR3 1016 aaKnown RBP17.53■□□□□ 0.4
SRSF1-201ENST00000258962 SLC8A2Q9UPR5 921 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 CHKBQ9Y259 395 aa17.53■□□□□ 0.4
SRSF1-201ENST00000258962 LDB2O43679 373 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 RFPL1O75677 317 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 F7P08709 466 aaPredicted RBP17.52■□□□□ 0.4
SRSF1-201ENST00000258962 CNTFP26441 200 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 GP5P40197 560 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 SLC18A1P54219 525 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 NHLH1Q02575 133 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 SLC18A2Q05940 514 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 MESP2Q0VG99 397 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 TRAF2Q12933 501 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 LRRC14Q15048 493 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 CNGA3Q16281 694 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 LGSNQ5TDP6 509 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 MROH9Q5TGP6 573 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 KIAA0930Q6ICG6 404 aaPredicted RBP17.52■□□□□ 0.4
SRSF1-201ENST00000258962 SRLQ86TD4 932 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 BANPQ8N9N5 519 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 MTBPQ96DY7 904 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 MCMBPQ9BTE3 642 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 FAM126AQ9BYI3 521 aaPredicted RBP17.52■□□□□ 0.4
SRSF1-201ENST00000258962 TM6SF2Q9BZW4 377 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 MLXIPLQ9NP71 852 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 IARS2Q9NSE4 1012 aaKnown RBP17.52■□□□□ 0.4
SRSF1-201ENST00000258962 GGA2Q9UJY4 613 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 FBXO10Q9UK96 956 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 PCDHGC4Q9Y5F7 938 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 RAI2Q9Y5P3 530 aa17.52■□□□□ 0.4
SRSF1-201ENST00000258962 CXorf51AA0A1B0GTR3 108 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 GOLGA8TH3BQL2 631 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 TRIM24O15164 1050 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF821O75541 412 aaPredicted RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 VAPBO95292 243 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 PAPSS2O95340 614 aaPredicted RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 PDHA1P08559 390 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 CISD3P0C7P0 127 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 PYGBP11216 843 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 PABPC1P11940 636 aaKnown RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 RPA3P35244 121 aaPredicted RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 TIE1P35590 1138 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 CCNFP41002 786 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 STK19P49842 368 aaPredicted RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 WDR4P57081 412 aaKnown RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 RALGPS1Q5JS13 557 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 ZC3H14Q6PJT7 736 aaKnown RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 TSSK4Q6SA08 328 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 TIFABQ6ZNK6 161 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 OR13J1Q8NGT2 312 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 ALKBH8Q96BT7 664 aaKnown RBP17.52■□□□□ 0.39
SRSF1-201ENST00000258962 FAM122AQ96E09 287 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 RBBP8Q99708 897 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 GGT7Q9UJ14 662 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 SLC27A6Q9Y2P4 619 aa17.52■□□□□ 0.39
SRSF1-201ENST00000258962 BPTFQ12830 3046 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 SIN3BO75182 1162 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 PIRTP0C851 137 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 SRCP12931 536 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 CA4P22748 312 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 AP1S1P61966 158 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 SLC20A2Q08357 652 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 HSF5Q4G112 596 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-201ENST00000258962 GRTP1Q5TC63 336 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 SYT13Q7L8C5 426 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms