RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CCDC74AQ96AQ1 378 aa19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 HIC2Q96JB3 615 aa19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 LGR4Q9BXB1 951 aa19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 NOD2Q9HC29 1040 aa19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 FGF22Q9HCT0 170 aa19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 ASCL3Q9NQ33 180 aa19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 BZW2Q9Y6E2 419 aaKnown RBP19.08■□□□□ 0.64
TM6SF1-201ENST00000258909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 CACNB4O00305 520 aaPredicted RBP19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 SERPING1P05155 500 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 CR2P20023 1033 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 SSR1P43307 286 aaKnown RBP19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 SLC25A11Q02978 314 aaKnown RBP19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 MMRN1Q13201 1228 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 GKN2Q86XP6 184 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 CPNE8Q86YQ8 564 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 SFTPA2Q8IWL1 248 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 ATPAF2Q8N5M1 289 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 OR56A4Q8NGH8 313 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 ATL2Q8NHH9 583 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 SYN2Q92777 582 aaPredicted RBP19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 IP6K2Q9UHH9 426 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 MOSPD1Q9UJG1 213 aa19.07■□□□□ 0.64
TM6SF1-201ENST00000258909 UNC13CQ8NB66 2214 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 DXOO77932 396 aaKnown RBP19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 CD48P09326 243 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 PDX1P52945 283 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 CXADRP78310 365 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 ZBED6P86452 979 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 TRAF2Q12933 501 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 SPIDRQ14159 915 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 KRT81Q14533 505 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 CNGA3Q16281 694 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 LVRNQ6Q4G3 990 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 TEKT4Q8WW24 435 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 NUDCD1Q96RS6 583 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 RBM15Q96T37 977 aaKnown RBP eCLIP19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 SUDS3Q9H7L9 328 aaPredicted RBP19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 CAPN11Q9UMQ6 739 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 DGKBQ9Y6T7 804 aa19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 GCN1Q92616 2671 aaKnown RBP19.06■□□□□ 0.64
TM6SF1-201ENST00000258909 ARHGEF17Q96PE2 2063 aaPredicted RBP19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 EIF4E1BA6NMX2 242 aaKnown RBP19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 HTRA2O43464 458 aaPredicted RBP19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 TCEA3O75764 348 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 CPP00450 1065 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 CYP1A2P05177 515 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 IL4RP24394 825 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 RBMS1P29558 406 aaKnown RBP19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 GJC1P36383 396 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 CDH6P55285 790 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 KIAA1024LP59773 190 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 ERVPABLB-1P60509 514 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 CCDC122Q5T0U0 273 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 PNCKQ6P2M8 343 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 ALKBH5Q6P6C2 394 aaKnown RBP19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 TAF8Q7Z7C8 310 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 SDR16C5Q8N3Y7 309 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 NIPA2Q8N8Q9 360 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 CCL4L1Q8NHW4 92 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 PRR11Q96HE9 360 aaPredicted RBP19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 MGME1Q9BQP7 344 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 TMEM168Q9H0V1 697 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 WDR26Q9H7D7 661 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 CYP4F12Q9HCS2 524 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 IFNKQ9P0W0 207 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 ATMQ13315 3056 aa19.05■□□□□ 0.64
TM6SF1-201ENST00000258909 A0A0U1RQS6 177 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 GOLGA6L19H0YKK7 550 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 MAP3K6O95382 1288 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 PRB1P04280 392 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 GYPCP04921 128 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 TRIM23P36406 574 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 HSPA9P38646 679 aaKnown RBP19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 MMP13P45452 471 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 CCL7P80098 99 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 ATP13A4Q4VNC1 1196 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 MARC1Q5VT66 337 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 B3GNT8Q7Z7M8 397 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 BBS5Q8N3I7 341 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 FAM46DQ8NEK8 389 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 NSMCE1Q8WV22 266 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 NUS1Q96E22 293 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 COQ10AQ96MF6 247 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 SLC46A1Q96NT5 459 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 SMIM14Q96QK8 99 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 UBL7Q96S82 380 aaPredicted RBP19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 NT5MQ9NPB1 228 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 THSD1Q9NS62 852 aa19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 LUC7L2Q9Y383 392 aaKnown RBP19.04■□□□□ 0.64
TM6SF1-201ENST00000258909 MYO1FO00160 1098 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 NTN3O00634 580 aaPredicted RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 KLK10O43240 276 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 SOCS5O75159 536 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 HEXIM1O94992 359 aaKnown RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 RPLP0P05388 317 aaKnown RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 CTPS1P17812 591 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 LHCGRP22888 699 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 KELP23276 732 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms