RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PCDHA4Q9UN74 947 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 HSBP1L1C9JCN9 74 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 DFFAO00273 331 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CACNB4O00305 520 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CIDEAO60543 219 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CABYRO75952 493 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SUPT7LO94864 414 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SOX30O94993 753 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 GLULP15104 373 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 LBPP18428 481 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 NELFEP18615 380 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ABCE1P61221 599 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ERVK-9P63128 1117 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC18A2Q05940 514 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 BST2Q10589 180 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RPA4Q13156 261 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TBX2Q13207 712 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 DYRK1AQ13627 763 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TTC23Q5W5X9 447 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 LRRC66Q68CR7 880 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TPGS1Q6ZTW0 290 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CREG2Q8IUH2 290 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 LHFPL5Q8TAF8 219 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CCNL2Q96S94 520 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TMEM138Q9NPI0 162 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 LOC105371267A0A1B0GV96 52 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 NEDD8-MDP1E9PL57 170 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAM23O75077 832 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 LARGE1O95461 756 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RETP07949 1114 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RALBP11234 206 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ANXA8P13928 327 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 IFNAR1P17181 557 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 MLLT3P42568 568 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TOB2Q14106 344 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 PON3Q15166 354 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TSNQ15631 228 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RTP2Q5QGT7 225 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ANXA8L1Q5VT79 327 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM160B1Q5W0V3 765 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 FOXR2Q6PJQ5 311 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TMEM26Q6ZUK4 368 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 MARVELD2Q8N4S9 558 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC15A4Q8N697 577 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TTLL6Q8N841 843 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 GSTCDQ8NEC7 633 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TERB2Q8NHR7 220 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 BSNDQ8WZ55 320 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CLPBQ9H078 707 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CCDC86Q9H6F5 360 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 LATS2Q9NRM7 1088 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ARMCX1Q9P291 453 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 EIF3KQ9UBQ5 218 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SRRDQ9UH36 339 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAMTS1Q9UHI8 967 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 PCDHGB1Q9Y5G3 927 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 A0A088AWK7 358 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CLCA1A8K7I4 914 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TPST1O60507 370 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 IFNA10P01566 189 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 PROCP04070 461 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CYP3A4P08684 503 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CCNYL3P0C7X3 344 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SAGP10523 405 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RASA1P20936 1047 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 BPIFB3P59826 476 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 PDK1Q15118 436 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TRIP4Q15650 581 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 DALRD3Q5D0E6 543 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 INTS5Q6P9B9 1019 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 B3GNT2Q9NY97 397 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CDY1Q9Y6F8 540 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 BCL9O00512 1426 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SSU72P8A0A1W2PR75 194 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 GPR89AB7ZAQ6 455 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 JRKO75564 520 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 RECQL5O94762 991 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 GPR89BP0CG08 455 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC15A1P46059 708 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 GBX2P52951 348 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 TMBIM6P55061 237 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PPATQ06203 517 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF235Q14590 738 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 GRK1Q15835 563 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 XKR9Q5GH70 373 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLFN13Q68D06 897 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PGAP1Q75T13 922 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLFN12Q8IYM2 578 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 OR7G3Q8NG95 312 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 HYLS1Q96M11 299 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MED15Q96RN5 788 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 AIF1LQ9BQI0 150 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ARL8BQ9NVJ2 186 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 CLCA2Q9UQC9 943 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 TOPAZ1Q8N9V7 1692 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAMTSL3P82987 1691 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 WWP2O00308 870 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ATP6V1B2P21281 511 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms