RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 VPS50Q96JG6 964 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ADAM2Q99965 735 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 HS3ST4Q9Y661 456 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ARHGAP10A1A4S6 786 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 UBFD1O14562 309 aaKnown RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 GIPC1O14908 333 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ITGB6P18564 788 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ARCN1P48444 511 aaKnown RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 RDH11Q8TC12 318 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 C19orf60Q96EN9 201 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 RMND5BQ96G75 393 aaPredicted RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 GPR78Q96P69 363 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ACOX2Q99424 681 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 CNOT6Q9ULM6 557 aaKnown RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 ENPP3O14638 875 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 GABRDO14764 452 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 IRAK2O43187 625 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 RHOBTB1O94844 696 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 CCNCP24863 283 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 AXLP30530 894 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 DIO3P55073 304 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 ZNF235Q14590 738 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 NEDD8Q15843 81 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 RABL3Q5HYI8 236 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 C10orf120Q5SQS8 335 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 DNAJC14Q6Y2X3 702 aaPredicted RBP13.53□□□□□ -0.24
VHL-201ENST00000256474 RAB44Q7Z6P3 723 aaPredicted RBP13.53□□□□□ -0.24
VHL-201ENST00000256474 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 TMEM74Q96NL1 305 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 IGSF5Q9NSI5 407 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 EVLQ9UI08 416 aaPredicted RBP13.53□□□□□ -0.24
VHL-201ENST00000256474 USP22Q9UPT9 525 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 SCNN1BP51168 640 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 POU4F1Q01851 419 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 IKBKEQ14164 716 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 RBBP7Q16576 425 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 POTEHQ6S545 545 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 CPNE9Q8IYJ1 553 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 THEM5Q8N1Q8 247 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 MAGEE2Q8TD90 523 aaPredicted RBP13.53□□□□□ -0.24
VHL-201ENST00000256474 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 CDK15Q96Q40 435 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 SEPT5Q99719 369 aaPredicted RBP13.53□□□□□ -0.24
VHL-201ENST00000256474 CCDC28BQ9BUN5 200 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 UNC93B1Q9H1C4 597 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 SOCS2O14508 198 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 KATNA1O75449 491 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 ATP6V1B2P21281 511 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 ACVRL1P37023 503 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 NFYCQ13952 458 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 MAPRE2Q15555 327 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 TECRLQ5HYJ1 363 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 RAB26Q9ULW5 256 aa13.53□□□□□ -0.24
VHL-201ENST00000256474 TDRKHQ9Y2W6 561 aaKnown RBP13.53□□□□□ -0.24
VHL-201ENST00000256474 RBP1P09455 135 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 NR4A1P22736 598 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 GGT5P36269 586 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 CPT1AP50416 773 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 TPD52P55327 224 aaPredicted RBP13.52□□□□□ -0.24
VHL-201ENST00000256474 XIAPP98170 497 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 IL1RL1Q01638 556 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 SQLEQ14534 574 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 C11orf91Q3C1V1 193 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.24
VHL-201ENST00000256474 PTERQ96BW5 349 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 SLC25A23Q9BV35 468 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 MAF1Q9H063 256 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 RNF112Q9ULX5 631 aa13.52□□□□□ -0.24
VHL-201ENST00000256474 A0A087X1B8 175 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 SLC12A8A0AV02 714 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 ACOT8O14734 319 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.25
VHL-201ENST00000256474 PSMD3O43242 534 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 MYCP01106 439 aaPredicted RBP13.52□□□□□ -0.25
VHL-201ENST00000256474 OR1E1P30953 314 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 SH3BP2P78314 561 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 SGO1Q5FBB7 561 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 INTS6LQ5JSJ4 861 aaKnown RBP13.52□□□□□ -0.25
VHL-201ENST00000256474 TMEM207Q6UWW9 146 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 C2CD4AQ8NCU7 369 aaPredicted RBP13.52□□□□□ -0.25
VHL-201ENST00000256474 ASB9Q96DX5 294 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 FBXL20Q96IG2 436 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 ZNF711Q9Y462 761 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 A0A1B0GTL3 188 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 GPR39O43194 453 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 GLP2RO95838 553 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 SLC2A3P11169 496 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 PBX3P40426 434 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 PIK3CGP48736 1102 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 TAF1CQ15572 869 aaPredicted RBP13.52□□□□□ -0.25
VHL-201ENST00000256474 TIGD2Q4W5G0 525 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 CHSY3Q70JA7 882 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms