RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ERI2A8K979 691 aaKnown RBP20.5■□□□□ 0.87
RARA-201ENST00000254066 GRAP2O75791 330 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 ITIH1P19827 911 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 ATP5F1P24539 256 aaPredicted RBP20.5■□□□□ 0.87
RARA-201ENST00000254066 NPY2RP49146 381 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 SNX16P57768 344 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 TOP3AQ13472 1001 aaPredicted RBP20.5■□□□□ 0.87
RARA-201ENST00000254066 DGUOKQ16854 277 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 TSTD2Q5T7W7 516 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 THAP5Q7Z6K1 395 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 PSTKQ8IV42 348 aaKnown RBP20.5■□□□□ 0.87
RARA-201ENST00000254066 CENPLQ8N0S6 344 aaPredicted RBP20.5■□□□□ 0.87
RARA-201ENST00000254066 SCML4Q8N228 414 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 BEST2Q8NFU1 509 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 UBA3Q8TBC4 463 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 CDHR1Q96JP9 859 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 RDH12Q96NR8 316 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 NECTIN3Q9NQS3 549 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 USP3Q9Y6I4 520 aa20.5■□□□□ 0.87
RARA-201ENST00000254066 GRK3P35626 688 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 ADAM17P78536 824 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 CTF1Q16619 201 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 COQ5Q5HYK3 327 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 CNSTQ6PJW8 725 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 DCP2Q8IU60 420 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 ZDHHC17Q8IUH5 632 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 PDZD8Q8NEN9 1154 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 OR52K1Q8NGK4 314 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 GABPB2Q8TAK5 448 aaPredicted RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 ZFP90Q8TF47 636 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 CENPIQ92674 756 aaPredicted RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 HEXIM2Q96MH2 286 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 MUS81Q96NY9 551 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 MRPL57Q9BQC6 102 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 BDH2Q9BUT1 245 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 WARS2Q9UGM6 360 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 TESMINQ9Y4I5 508 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 FAM172BPA6NC97 362 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 ARPC2O15144 300 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 MSCO60682 206 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 AP2A1O95782 977 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 ELK4P28324 431 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 DNASE1L3Q13609 305 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 UGP2Q16851 508 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 CCSAPQ6IQ19 270 aaPredicted RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 ZBTB33Q86T24 672 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 HEATR4Q86WZ0 1026 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 PTRH1Q86Y79 214 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 ACVR1CQ8NER5 493 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 OR7G1Q8NGA0 311 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 PHF10Q8WUB8 498 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 GPR78Q96P69 363 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 LGMNQ99538 433 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 TDRD3Q9H7E2 651 aaKnown RBP20.49■□□□□ 0.87
RARA-201ENST00000254066 ANKHQ9HCJ1 492 aa20.49■□□□□ 0.87
RARA-201ENST00000254066 KMOO15229 486 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 TPST1O60507 370 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 GABARAPO95166 117 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 S100BP04271 92 aaPredicted RBP20.48■□□□□ 0.87
RARA-201ENST00000254066 SUPT20HL2P0C7V6 817 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 ATICP31939 592 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 PHC1P78364 1004 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 SMAD1Q15797 465 aaKnown RBP20.48■□□□□ 0.87
RARA-201ENST00000254066 SUPT20HL1Q3ZLR7 823 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 SLC22A16Q86VW1 577 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 OR6Q1Q8NGQ2 317 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 KHSRPQ92945 711 aaKnown RBP eCLIP20.48■□□□□ 0.87
RARA-201ENST00000254066 KCTD15Q96SI1 283 aaPredicted RBP20.48■□□□□ 0.87
RARA-201ENST00000254066 ANAPC2Q9UJX6 822 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 BAG5Q9UL15 447 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 COL4A5P29400 1685 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 ASNA1O43681 348 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 HTR1BP28222 390 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 OXTRP30559 389 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 ARL4AP40617 200 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 GLRBP48167 497 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 CAPSQ13938 189 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 E2F2Q14209 437 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 PRPSAP1Q14558 356 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 CYP51A1Q16850 503 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 DSG4Q86SJ6 1040 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 ZNF567Q8N184 647 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 C11orf84Q9BUA3 381 aaPredicted RBP20.48■□□□□ 0.87
RARA-201ENST00000254066 NIFKQ9BYG3 293 aaKnown RBP20.48■□□□□ 0.87
RARA-201ENST00000254066 IARS2Q9NSE4 1012 aaKnown RBP20.48■□□□□ 0.87
RARA-201ENST00000254066 MAP10Q9P2G4 905 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 HMGXB4Q9UGU5 601 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 DGKBQ9Y6T7 804 aa20.48■□□□□ 0.87
RARA-201ENST00000254066 TCRBV5S2A0A599 114 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 F5H423 210 aaPredicted RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 AP3B1O00203 1094 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 PSMD11O00231 422 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 GPX3P22352 226 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 DNAJB2P25686 324 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 CD40LGP29965 261 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 ECT2LQ008S8 904 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 BST2Q10589 180 aaKnown RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 EPS8Q12929 822 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 ORC1Q13415 861 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms