RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FOXJ1Q92949 421 aa14.14□□□□□ -0.15
VPS25-201ENST00000253794 COQ10AQ96MF6 247 aa14.14□□□□□ -0.15
VPS25-201ENST00000253794 LRRC1Q9BTT6 524 aa14.14□□□□□ -0.15
VPS25-201ENST00000253794 GPR174Q9BXC1 333 aa14.14□□□□□ -0.15
VPS25-201ENST00000253794 FRMD8Q9BZ67 464 aaPredicted RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 C6orf106Q9H6K1 298 aaPredicted RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 XAB2Q9HCS7 855 aaKnown RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 WHRNQ9P202 907 aa14.14□□□□□ -0.15
VPS25-201ENST00000253794 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 ZFR2Q9UPR6 939 aaKnown RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 UTP11Q9Y3A2 253 aaKnown RBP14.14□□□□□ -0.15
VPS25-201ENST00000253794 SPO11Q9Y5K1 396 aa14.14□□□□□ -0.15
VPS25-201ENST00000253794 DMDP11532 3685 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3DA0A087WVF3 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3IA0A087WXS9 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3EA0A087X179 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3KA0A087X1G2 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 RGSL1A5PLK6 1076 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3FA6NER0 549 aaPredicted RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 METTL12A8MUP2 240 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3LB9A6J9 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 RNGTTO60942 597 aaKnown RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 NDUFS2O75306 463 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 ELFN1P0C7U0 828 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3HP0C7X1 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 GM2AP17900 193 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 HMGCLP35914 325 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 GRIA1P42261 906 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 RPL21P46778 160 aaKnown RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 LMAN1P49257 510 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 LIG3P49916 1009 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 PTPN5P54829 565 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 PPP2CBP62714 309 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 PPP2CAP67775 309 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 SARNPP82979 210 aaKnown RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 RPL6Q02878 288 aaKnown RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 PTSQ03393 145 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 KCTD19Q17RG1 926 aaPredicted RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 PLK5Q496M5 336 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 IZUMO3Q5VZ72 239 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 LRRC66Q68CR7 880 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3GQ6DHY5 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3CQ6IPX1 549 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 CYP2U1Q7Z449 544 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TMC3Q7Z5M5 1100 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TSPAN33Q86UF1 283 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 TBC1D3Q8IZP1 549 aaPredicted RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 SLC25A41Q8N5S1 370 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 OR52K1Q8NGK4 314 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 BRSK1Q8TDC3 778 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 CXorf40AQ8TE69 158 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 DNASE2BQ8WZ79 361 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 EID2BQ96D98 161 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 LENG8Q96PV6 779 aaPredicted RBP14.13□□□□□ -0.15
VPS25-201ENST00000253794 SMIM14Q96QK8 99 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 RANBP9Q96S59 729 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 APOL2Q9BQE5 337 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 ORAI3Q9BRQ5 295 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 EPC1Q9H2F5 836 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 GRHL1Q9NZI5 618 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 ZNF711Q9Y462 761 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 MUC6Q6W4X9 2439 aa14.13□□□□□ -0.15
VPS25-201ENST00000253794 NUMA1Q14980 2115 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 A0A1W2PQU0 124 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 NEMP1O14524 444 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 PPFIA2O75334 1257 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 PCDH8O95206 1070 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 C6P13671 934 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 NPY2RP49146 381 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 TUBB4BP68371 445 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 SRSF5Q13243 272 aaKnown RBP14.12□□□□□ -0.15
VPS25-201ENST00000253794 ARHGEF7Q14155 803 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 PTPRRQ15256 657 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 TAF1AQ15573 450 aaPredicted RBP14.12□□□□□ -0.15
VPS25-201ENST00000253794 SEL1L3Q68CR1 1132 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 PPP1R21Q6ZMI0 780 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 ZNF765Q7L2R6 523 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 LPCAT2Q7L5N7 544 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 LYSMD3Q7Z3D4 306 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 TECPR1Q7Z6L1 1165 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 CAND1Q86VP6 1230 aaKnown RBP14.12□□□□□ -0.15
VPS25-201ENST00000253794 NLRP8Q86W28 1048 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 SLC41A1Q8IVJ1 513 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 DENND6BQ8NEG7 585 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 DTX3LQ8TDB6 740 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 PEX13Q92968 403 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 BIRC7Q96CA5 298 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 SERPINB12Q96P63 405 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 FAM129AQ9BZQ8 928 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 CDH19Q9H159 772 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 ZFYVE1Q9HBF4 777 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 RIMKLBQ9ULI2 386 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 DMTF1Q9Y222 760 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 INVSQ9Y283 1065 aa14.12□□□□□ -0.15
VPS25-201ENST00000253794 C1orf232A0A0U1RR37 186 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 A0A1W2PPC4 97 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 IGLON5A6NGN9 336 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 MAP3K13O43283 966 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 MMP20O60882 483 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms