RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 JAK1P23458 1154 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ARPP19P56211 112 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SLC25A52Q3SY17 297 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FAM26DQ5JW98 314 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 RBM48Q5RL73 367 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FAM182AQ5T1J6 154 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CCNYL2Q5T2Q4 361 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 INTS11Q5TA45 600 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FAM45BPQ6NSW5 357 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TOP6BLQ8N6T0 577 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FAM45AQ8TCE6 357 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SLC45A3Q96JT2 553 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SPATA33Q96N06 139 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 LENG8Q96PV6 779 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PLEKHG4BQ96PX9 1271 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 RAD21L1Q9H4I0 556 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TREX1Q9NSU2 369 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 OXSMQ9NWU1 459 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SYBUQ9NX95 663 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FNIP2Q9P278 1114 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 B3GNT3Q9Y2A9 372 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 NUP210Q8TEM1 1887 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 KIAA1549LQ6ZVL6 1849 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 DHRS12A0PJE2 317 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MOXD2PA6NHM9 499 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CD3EAPO15446 510 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FGF10O15520 208 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PIAS1O75925 651 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TOP3BO95985 862 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 GSNP06396 782 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 LTA4HP09960 611 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 LBPP18428 481 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CYP2B6P20813 491 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MATKP42679 507 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PGFP49763 221 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TAF6P49848 677 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TUBP50607 506 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 AFF1P51825 1210 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ACVR1Q04771 509 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 GALNT1Q10472 559 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ORC1Q13415 861 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 GRIK4Q16099 956 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ATAD3BQ5T9A4 648 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MRNIPQ6NTE8 343 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CDR2LQ86X02 465 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PELI3Q8N2H9 469 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ANKFN1Q8N957 763 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 UBA3Q8TBC4 463 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 RNF139Q8WU17 664 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM63Q969Q1 353 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 DUS3LQ96G46 650 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 NSMCE3Q96MG7 304 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SMOQ99835 787 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 IARS2Q9NSE4 1012 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 RNF19AQ9NV58 838 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MAGEL2Q9UJ55 1249 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 LEF1Q9UJU2 399 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MAGED2Q9UNF1 606 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FADS3Q9Y5Q0 445 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CHD9Q3L8U1 2897 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 FAM155AB1AL88 458 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 C2P06681 752 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SLC2A3P11169 496 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MSH3P20585 1137 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 GRK3P35626 688 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ADCYAP1R1P41586 468 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TMBIM6P55061 237 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 DLG1Q12959 904 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 GRIK2Q13002 908 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SNAPC2Q13487 334 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 GPNMBQ14956 572 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SLC27A1Q6PCB7 646 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CHSY3Q70JA7 882 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 HORMAD1Q86X24 394 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CLEC4FQ8N1N0 589 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 DNAJB8Q8NHS0 232 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 VWCEQ96DN2 955 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CLPTM1LQ96KA5 538 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 NSMCE2Q96MF7 247 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ZBTB26Q9HCK0 441 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PREBQ9HCU5 417 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PIGVQ9NUD9 493 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 AKAP7Q9P0M2 348 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 POLG2Q9UHN1 485 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TSC22D4Q9Y3Q8 395 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SLC30A1Q9Y6M5 507 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM64BA6NI03 449 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CCDC154A6NI56 674 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 KCNU1A8MYU2 1149 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 H0YAE9 185 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 NRP1O14786 923 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MFSD11O43934 449 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SNX2O60749 519 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 KRT8P05787 483 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TFEBP19484 476 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 S100A5P33763 92 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CXCR3P49682 368 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 TKTL1P51854 596 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 MAPRE1Q15691 268 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms