RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TRAFD1O14545 582 aaPredicted RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 TPM2P07951 284 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 ALPIP09923 528 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 RBMS1P29558 406 aaKnown RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 CCKBRP32239 447 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 TPI1P60174 286 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 SRP54P61011 504 aaKnown RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 CLN3Q13286 438 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 MAMLD1Q13495 774 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 INPP5AQ14642 412 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 ARHGAP40Q5TG30 622 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 ACAD10Q6JQN1 1059 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 ESRP1Q6NXG1 681 aaKnown RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 INO80CQ6PI98 192 aaPredicted RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 ZNF354CQ86Y25 554 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 NPWQ8N729 165 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 PLA2G15Q8NCC3 412 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 TSEN2Q8NCE0 465 aaKnown RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 GPR156Q8NFN8 814 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 OR1E3Q8WZA6 343 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 TSACCQ96A04 125 aaPredicted RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 FUBP1Q96AE4 644 aaKnown RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 CCDC74AQ96AQ1 378 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 CELF6Q96J87 481 aaKnown RBP10.37□□□□□ -0.75
VPS50-201ENST00000251739 WDR92Q96MX6 357 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 NCAPGQ9BPX3 1015 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 SEMA4CQ9C0C4 833 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 SLC39A8Q9C0K1 460 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 FGF22Q9HCT0 170 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 TAS2R14Q9NYV8 317 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 MYO6Q9UM54 1294 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 OR1A2Q9Y585 309 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 PCDHGA7Q9Y5G6 932 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 LRRK2Q5S007 2527 aa10.37□□□□□ -0.75
VPS50-201ENST00000251739 TMEM202A6NGA9 273 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 ARHGAP42A6NI28 874 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 PLD2O14939 933 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 NOBOXO60393 691 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 TNFSF15O95150 251 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 PRKCGP05129 697 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 HOXC4P09017 264 aaPredicted RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 ATP1A3P13637 1013 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 FERP16591 822 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 XPAP23025 273 aaPredicted RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 HTR1BP28222 390 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 TRIM23P36406 574 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 PAPOLAP51003 745 aaKnown RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 UBXN1Q04323 297 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 EIF3IQ13347 325 aaKnown RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 DPYSQ14117 519 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 ERAP2Q6P179 960 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 DCUN1D2Q6PH85 259 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 OGFOD3Q6PK18 319 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 LIPIQ6XZB0 460 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 RFX8Q6ZV50 586 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 DPPA4Q7L190 304 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 SRLQ86TD4 932 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 PELI3Q8N2H9 469 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 ARL14Q8N4G2 192 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 OR6C4Q8NGE1 309 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 FNIP1Q8TF40 1166 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 SCG3Q8WXD2 468 aaKnown RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 CCDC97Q96F63 343 aaPredicted RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 KCTD15Q96SI1 283 aaPredicted RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 ARHGAP9Q9BRR9 750 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.36□□□□□ -0.75
VPS50-201ENST00000251739 SNRNP25Q9BV90 132 aaKnown RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 TRIM7Q9C029 511 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 ATP13A3Q9H7F0 1226 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 DONSONQ9NYP3 566 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 KLQ9UEF7 1012 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 APPL1Q9UKG1 709 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 ATXN7L1Q9ULK2 861 aaPredicted RBP10.36□□□□□ -0.75
VPS50-201ENST00000251739 GPR34Q9UPC5 381 aa10.36□□□□□ -0.75
VPS50-201ENST00000251739 NBASA2RRP1 2371 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 TMEM191CA6NGB0 347 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 CAPN8A6NHC0 703 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 EEF2KO00418 725 aaKnown RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 TNFRSF10CO14798 259 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 RECQL5O94762 991 aaPredicted RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 PEX11BO96011 259 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 PCCBP05166 539 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 RPLP0P05388 317 aaKnown RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 ERCC2P18074 760 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 CR2P20023 1033 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 SERPINA4P29622 427 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 UGT1A5P35504 534 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 HCAR3P49019 387 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 AP1S1P61966 158 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 CCL7P80098 99 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 IL10RBQ08334 325 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 NSUN2Q08J23 767 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS50-201ENST00000251739 TCEA2Q15560 299 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 STX1AQ16623 288 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 E4F1Q66K89 784 aaPredicted RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 PPP1R2P3Q6NXS1 205 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 ENPP7Q6UWV6 458 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 ARHGAP36Q6ZRI8 547 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 ZNF605Q86T29 641 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms