RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 RPS27LQ71UM5 84 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 RELL1Q8IUW5 271 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 FAM126BQ8IXS8 530 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 KLRG1Q96E93 195 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PCYT2Q99447 389 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 EPB41L1Q9H4G0 881 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DOLKQ9UPQ8 538 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DDX60LQ5H9U9 1706 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DPYSL4O14531 572 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 SORBS2O94875 1100 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PFKPQ01813 784 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DGCR6Q14129 220 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GPR158Q5T848 1215 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM110Q86TL2 294 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 TP53INP2Q8IXH6 220 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GANCQ8TET4 914 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ADGRE3Q9BY15 652 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GBA3Q9H227 469 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 SPAG4Q9NPE6 437 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ABCB10Q9NRK6 738 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 KANSL3Q9P2N6 904 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ADAMTS6Q9UKP5 1117 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PTCH2Q9Y6C5 1203 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DGKBQ9Y6T7 804 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 RTN3O95197 1032 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CELF2O95319 508 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GCAP28676 217 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DEFA1P59665 94 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DEFA3P59666 94 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DPYSL2Q16555 572 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 FAM171A1Q5VUB5 890 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 FAM151BQ6UXP7 276 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 OR4K2Q8NGD2 314 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DQX1Q8TE96 717 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 UTP15Q8TED0 518 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 C19orf60Q96EN9 201 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 FAXDC2Q96IV6 333 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CCDC106Q9BWC9 280 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 SLC39A8Q9C0K1 460 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PIGVQ9NUD9 493 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 TAS2R13Q9NYV9 303 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GMIPQ9P107 970 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 UXTQ9UBK9 157 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 STK39Q9UEW8 545 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ADAMTS7Q9UKP4 1686 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 TREHO43280 583 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 FAM20BO75063 409 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 C22orf31O95567 290 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PRIM2P49643 509 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PSMD5Q16401 504 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 KLHDC10Q6PID8 442 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 OR8H2Q8N162 312 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ACTRT2Q8TDY3 377 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 LINGO1Q96FE5 620 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 A0A0J9YYE9 177 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 J3QRK9 145 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SEC22BO75396 215 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 CD52P31358 61 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NOMO2Q5JPE7 1267 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 IL27RAQ6UWB1 636 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF621Q6ZSS3 439 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 FBXL8Q96CD0 374 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZMAT2Q96NC0 199 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 GPBP1L1Q9HC44 474 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PCDHB5Q9Y5E4 795 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 KRT6AP02538 564 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 KRT6BP04259 564 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 CES1P23141 567 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 S100A3P33764 101 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 KRT6CP48668 564 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NR1D2Q14995 579 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 GCNT7Q6ZNI0 430 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ZC3HC1Q86WB0 502 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SPPL2AQ8TCT8 520 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 B3GALT6Q96L58 329 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 FTHL17Q9BXU8 183 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 CXorf21Q9HAI6 301 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 UBA2Q9UBT2 640 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SCN2AQ99250 2005 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 NPHS1O60500 1241 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 IL2P60568 153 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PCLAFQ15004 111 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TERB1Q8NA31 727 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 SLC16A10Q8TF71 515 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 KLQ9UEF7 1012 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 A0A1W2PQH9 124 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 C9IYK1 514 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 STAU1O95793 577 aaKnown RBP4.62□□□□□ -1.67
VPS13C-201ENST00000249837 GNAZP19086 355 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 ITGALP20701 1170 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 GJA9P57773 515 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 DAOAP59103 153 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 BROXQ5VW32 411 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 UGT3A1Q6NUS8 523 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 GALNT18Q6P9A2 607 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 PAOXQ6QHF9 649 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 B3GNT9Q6UX72 402 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TIFABQ6ZNK6 161 aa4.62□□□□□ -1.67
VPS13C-201ENST00000249837 TLK2Q86UE8 772 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms