RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 HSPA1AP0DMV8 641 aaKnown RBP25.61■■□□□ 1.69
RAB40C-201ENST00000248139 HSPA1BP0DMV9 641 aaKnown RBP25.61■■□□□ 1.69
RAB40C-201ENST00000248139 SH3BP2P78314 561 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 DSC3Q14574 896 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 ACAP2Q15057 778 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 GPR162Q16538 588 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 GEN1Q17RS7 908 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 BEND5Q7L4P6 421 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 MFN1Q8IWA4 741 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 UMODL1-AS1Q8N2C9 162 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 ARRDC2Q8TBH0 407 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 CALML6Q8TD86 181 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 TRIB2Q92519 343 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 EML4Q9HC35 981 aaKnown RBP25.61■■□□□ 1.69
RAB40C-201ENST00000248139 TLR6Q9Y2C9 796 aa25.61■■□□□ 1.69
RAB40C-201ENST00000248139 A0A1B0GTL3 188 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 UBXN8O00124 270 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 DENRO43583 198 aaKnown RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 TFAP2AP05549 437 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 SOX11P35716 441 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 TRIM25Q14258 630 aaKnown RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 UNC50Q53HI1 259 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 METTL25Q8N6Q8 603 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 EME1Q96AY2 570 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 GRIP2Q9C0E4 1043 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 PRDM5Q9NQX1 630 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 GABRQQ9UN88 632 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 COL4A4P53420 1690 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 MRASO14807 208 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 GOT2P00505 430 aaKnown RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 RBP1P09455 135 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 ATXN1LP0C7T5 689 aaKnown RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 RFTN1Q14699 578 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 ZNF678Q5SXM1 525 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 NUP93Q8N1F7 819 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 NAT14Q8WUY8 206 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 RPRD1AQ96P16 312 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 COQ10BQ9H8M1 238 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 C7orf72A4D263 438 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 PABPC4LP0CB38 370 aaKnown RBP25.6■■□□□ 1.69
RAB40C-201ENST00000248139 DNAJB1P25685 340 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 FUNDC1Q8IVP5 155 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 ASB9Q96DX5 294 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 VPS45Q9NRW7 570 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 SNX13Q9Y5W8 968 aa25.6■■□□□ 1.69
RAB40C-201ENST00000248139 MROH6A6NGR9 719 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 SNRPB2P08579 225 aaKnown RBP25.59■■□□□ 1.69
RAB40C-201ENST00000248139 PIM1P11309 404 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-201ENST00000248139 IMPDH1P20839 514 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 FKBP1BP68106 108 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 TIAL1Q01085 375 aaKnown RBP eCLIP25.59■■□□□ 1.69
RAB40C-201ENST00000248139 SQLEQ14534 574 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 KCNA10Q16322 511 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 PFKFB4Q16877 469 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 MGAT5BQ3V5L5 792 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 MON1AQ86VX9 555 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 PTGR2Q8N8N7 351 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-201ENST00000248139 SLCO4A1Q96BD0 722 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 POLR3BQ9NW08 1133 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-201ENST00000248139 AP4S1Q9Y587 144 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 H3BMM5 538 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 SLC7A2P52569 658 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 ECT2LQ008S8 904 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 STX5Q13190 355 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 OR4D1Q15615 310 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 RTN4RL1Q86UN2 441 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-201ENST00000248139 RETREG3Q86VR2 466 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 UNC93B1Q9H1C4 597 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 AKTIPQ9H8T0 292 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 RRAGCQ9HB90 399 aa25.59■■□□□ 1.69
RAB40C-201ENST00000248139 CCDC162PA2VCL2 907 aa25.58■■□□□ 1.69
RAB40C-201ENST00000248139 CCDC160A6NGH7 325 aa25.58■■□□□ 1.69
RAB40C-201ENST00000248139 RHOQP17081 205 aa25.58■■□□□ 1.69
RAB40C-201ENST00000248139 CHRM3P20309 590 aa25.58■■□□□ 1.69
RAB40C-201ENST00000248139 IRF5Q13568 498 aa25.58■■□□□ 1.69
RAB40C-201ENST00000248139 POLD3Q15054 466 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-201ENST00000248139 ADCY4Q8NFM4 1077 aa25.58■■□□□ 1.69
RAB40C-201ENST00000248139 FNDC3AQ9Y2H6 1198 aaKnown RBP25.58■■□□□ 1.69
RAB40C-201ENST00000248139 CLPTM1O96005 669 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 SATB1Q01826 763 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 GRB7Q14451 532 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 KIF19Q2TAC6 998 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 MTX3Q5HYI7 312 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 RBM44Q6ZP01 1051 aaKnown RBP25.58■■□□□ 1.68
RAB40C-201ENST00000248139 LARP4Q71RC2 724 aaKnown RBP eCLIP25.58■■□□□ 1.68
RAB40C-201ENST00000248139 TSPAN17Q96FV3 270 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 C1orf74Q96LT6 269 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 SLC29A1Q99808 456 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 BTRCQ9Y297 605 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 DNAJC15Q9Y5T4 150 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 DOCK4Q8N1I0 1966 aa25.58■■□□□ 1.68
RAB40C-201ENST00000248139 IGHA2P01877 340 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 RAB27AP51159 221 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 C10orf120Q5SQS8 335 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 ZFAND2BQ8WV99 257 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 C19orf60Q96EN9 201 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 EXOC2Q96KP1 924 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 CIB1Q99828 191 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 MFSD1Q9H3U5 465 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 BCAP29Q9UHQ4 241 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms