RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 SP140LQ9H930 580 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 LIN7BQ9HAP6 207 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 MID1IP1Q9NPA3 183 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 ITM2CQ9NQX7 267 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 SNTG1Q9NSN8 517 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 SLC35D1Q9NTN3 355 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 INTS13Q9NVM9 706 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 RCOR3Q9P2K3 495 aaPredicted RBP7.47□□□□□ -1.21
MTRF1-201ENST00000239852 CACNG4Q9UBN1 327 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 SLC39A10Q9ULF5 831 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 PIN4Q9Y237 131 aaKnown RBP7.47□□□□□ -1.21
MTRF1-201ENST00000239852 DTX4Q9Y2E6 619 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 RPH3AQ9Y2J0 694 aaPredicted RBP7.47□□□□□ -1.21
MTRF1-201ENST00000239852 PCDHGA9Q9Y5G4 932 aaKnown RBP7.47□□□□□ -1.21
MTRF1-201ENST00000239852 ADGRG4Q8IZF6 3080 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 NID2Q14112 1375 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 WDR81Q562E7 1941 aa7.47□□□□□ -1.21
MTRF1-201ENST00000239852 KIF26AQ9ULI4 1882 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 MED13LQ71F56 2210 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 BLACEA4D250 179 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 EFCAB10A6NFE3 127 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 PATE3B3GLJ2 98 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 SMAD7O15105 426 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 RFPL2O75678 378 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 PNPP00491 289 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ICAM1P05362 532 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 GNAI3P08754 354 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 FGFR1P11362 822 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CCNA2P20248 432 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 MAT2AP31153 395 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 PRRX1P54821 245 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 AIF1P55008 147 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ARL4CP56559 192 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 USP46P62068 366 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CXADRP78310 365 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 RPP30P78346 268 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 SSRP1Q08945 709 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 FADDQ13158 208 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ZNF177Q13360 481 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CAPRIN1Q14444 709 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 KARSQ15046 597 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 TCERG1LQ5VWI1 586 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 HAUS3Q68CZ6 603 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 DEGS2Q6QHC5 323 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 RNF207Q6ZRF8 634 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CYP4V2Q6ZWL3 525 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 PIWIL3Q7Z3Z3 882 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 DDX53Q86TM3 631 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 PRPF39Q86UA1 669 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ITIH5Q86UX2 942 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 MAP7D3Q8IWC1 876 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CCDC36Q8IYA8 594 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ZNF527Q8NB42 609 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ZSCAN1Q8NBB4 408 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 MCPH1Q8NEM0 835 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 RAB3IL1Q8TBN0 382 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 ADAMTS16Q8TE57 1224 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CCDC12Q8WUD4 166 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 HEXDCQ8WVB3 486 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 GATAD2BQ8WXI9 593 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 SPACA9Q96E40 222 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 RRP36Q96EU6 259 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 GDAP1L1Q96MZ0 367 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 SPATA33Q96N06 139 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CASD1Q96PB1 797 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CYTH2Q99418 400 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 STRA6Q9BX79 667 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 COPS7BQ9H9Q2 264 aaPredicted RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 INTS9Q9NV88 658 aaKnown RBP7.46□□□□□ -1.21
MTRF1-201ENST00000239852 C2orf42Q9NWW7 574 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 TMEM161AQ9NX61 479 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 COPG2Q9UBF2 871 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 CTNNAL1Q9UBT7 734 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 PCDHGA10Q9Y5H3 936 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 EML5Q05BV3 1969 aa7.46□□□□□ -1.21
MTRF1-201ENST00000239852 HIVEP3Q5T1R4 2406 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 PDZD2O15018 2839 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 PVALEFA0A1B0GWK0 134 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 PRSS44E7EML9 344 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 TO15178 435 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 OGTO15294 1046 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 CLDN3O15551 220 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 IRAK2O43187 625 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 PLA2G6O60733 806 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 ECI2O75521 394 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 GNAI2P04899 355 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 SERPINF2P08697 491 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 CNPP09543 421 aaKnown RBP7.46□□□□□ -1.22
MTRF1-201ENST00000239852 CPB1P15086 417 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 RAB4AP20338 218 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 CHMP24386 653 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 L1CAMP32004 1257 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 MAGEA11P43364 429 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 MFAP3P55082 362 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 CDH6P55285 790 aa7.46□□□□□ -1.22
MTRF1-201ENST00000239852 MRPS6P82932 125 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms