RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 BMT2Q1RMZ1 405 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ATAD3CQ5T2N8 411 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF470Q6ECI4 717 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 SH3BP5LQ7L8J4 393 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 OTOP3Q7RTS5 596 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 FEM1CQ96JP0 617 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 CINPQ9BW66 212 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 EXD2Q9NVH0 621 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 TBC1D30Q9Y2I9 924 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF804BA4D1E1 1349 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 A0A087X1B8 175 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 A0A0J9YYE9 177 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 MAP3K6O95382 1288 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 RFTN1Q14699 578 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-201ENST00000236192 WSCD2Q2TBF2 565 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 C11orf88Q6PI97 169 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 DGLUCYQ7Z3D6 616 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 SPAG16Q8N0X2 631 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 C7orf31Q8N865 590 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 KAT5Q92993 513 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 KCNK13Q9HB14 408 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 RASAL1O95294 804 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 CHRNA1P02708 482 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 MED22Q15528 200 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
VAMP4-201ENST00000236192 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF598Q86UK7 904 aaKnown RBP12.91□□□□□ -0.34
VAMP4-201ENST00000236192 PLCZ1Q86YW0 608 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 GLS2Q9UI32 602 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
VAMP4-201ENST00000236192 LSMEM1Q8N8F7 131 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 SHC3Q92529 594 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 PHF21BQ96EK2 531 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 REEP1Q9H902 201 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 SIX2Q9NPC8 291 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 CPS1P31327 1500 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 SLITRK5O94991 958 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 CLIC3O95833 236 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 FTH1P02794 183 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 CYP4B1P13584 511 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-201ENST00000236192 IGFBP5P24593 272 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 ELK4P28324 431 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 FMO4P31512 558 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 SLC51BQ86UW2 128 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 ZFP90Q8TF47 636 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 KDM4BO94953 1096 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 YWHAZP63104 245 aaKnown RBP12.9□□□□□ -0.34
VAMP4-201ENST00000236192 FUT2Q10981 343 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 DUOXA2Q1HG44 320 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 FAM209AQ5JX71 171 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
VAMP4-201ENST00000236192 SRFBP1Q8NEF9 429 aaKnown RBP12.9□□□□□ -0.34
VAMP4-201ENST00000236192 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 PSD2Q9BQI7 771 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 LHPPQ9H008 270 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 VRTNQ9H8Y1 702 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 NRBP2Q9NSY0 501 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 PAK1IP1Q9NWT1 392 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-201ENST00000236192 LYVE1Q9Y5Y7 322 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 ROBO2Q9HCK4 1378 aa12.9□□□□□ -0.34
VAMP4-201ENST00000236192 BCAS1O75363 584 aaPredicted RBP12.9□□□□□ -0.35
VAMP4-201ENST00000236192 PSIP1O75475 530 aaKnown RBP12.9□□□□□ -0.35
VAMP4-201ENST00000236192 PGDP52209 483 aa12.9□□□□□ -0.35
VAMP4-201ENST00000236192 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.35
VAMP4-201ENST00000236192 GLYATQ6IB77 296 aa12.9□□□□□ -0.35
VAMP4-201ENST00000236192 CLHC1Q8NHS4 586 aa12.9□□□□□ -0.35
VAMP4-201ENST00000236192 ADAM32Q8TC27 787 aa12.9□□□□□ -0.35
VAMP4-201ENST00000236192 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.35
VAMP4-201ENST00000236192 CERS2Q96G23 380 aa12.9□□□□□ -0.35
VAMP4-201ENST00000236192 AURKBQ96GD4 344 aaPredicted RBP12.9□□□□□ -0.35
VAMP4-201ENST00000236192 ZC3H10Q96K80 434 aaKnown RBP12.9□□□□□ -0.35
VAMP4-201ENST00000236192 CCDC32Q9BV29 185 aa12.9□□□□□ -0.35
VAMP4-201ENST00000236192 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 ERCC2P18074 760 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 MMP8P22894 467 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 RPA4Q13156 261 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 FSCN1Q16658 493 aaKnown RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 STON2Q8WXE9 905 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 MIR1-1HGQ9H1L0 117 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 ALG2Q9H553 416 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 SPON1Q9HCB6 807 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 MID1IP1Q9NPA3 183 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 UGT2A1Q9Y4X1 527 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 STMND1H3BQB6 276 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 ACADSBP45954 432 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms