RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OR2L5Q8NG80 312 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SLC22A8Q8TCC7 542 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SLC38A3Q99624 504 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 OR2AT4A6NND4 320 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 NCAM2O15394 837 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CYP2A6P11509 494 aaPredicted RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 UQCRBP14927 111 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ELK3P41970 407 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 PER3P56645 1201 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 VPS72Q15906 364 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 BATFQ16520 125 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 FAM131BQ86XD5 332 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 PLCZ1Q86YW0 608 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 GPR135Q8IZ08 494 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 HMGB4Q8WW32 186 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CKAP2Q8WWK9 683 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ZNF232Q9UNY5 417 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 PADI2Q9Y2J8 665 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 TOR1BO14657 336 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CRTAMO95727 393 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SERPINF2P08697 491 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 HDCP19113 662 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 RASA1P20936 1047 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CCNG2Q16589 344 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 HAGHLQ6PII5 290 aaPredicted RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 DNAJB14Q8TBM8 379 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ZSWIM1Q9BR11 485 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CST11Q9H112 138 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 PCDHGB3Q9Y5G1 929 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 MAU2Q9Y6X3 613 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CST1P01037 141 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CNTFP26441 200 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 TIE1P35590 1138 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CHKAP35790 457 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 MNDAP41218 407 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 NFKB2Q00653 900 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SYCE2Q6PIF2 218 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 C12orf56Q8IXR9 622 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 GALNT15Q8N3T1 639 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 MAGEE1Q9HCI5 957 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ABI3Q9P2A4 366 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 LYNP07948 512 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 PSKH1P11801 424 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 FRG1Q14331 258 aaKnown RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 USP45Q70EL2 814 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CFAP52Q8N1V2 620 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ATL1Q8WXF7 558 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 GAL3ST4Q96RP7 486 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ENAMQ9NRM1 1142 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CROCCQ5TZA2 2017 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 A8MUA0 341 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 FAM86B1E9PN63 330 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 LRATO95237 230 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SLC2A3P11169 496 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 OR2B6P58173 313 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ERVK-24P63145 666 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SCN1BQ07699 218 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 E2F2Q14209 437 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 C6orf52Q5T4I8 152 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 PIK3R6Q5UE93 754 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CES3Q6UWW8 571 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 MFSD7Q6UXD7 560 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SLC34A3Q8N130 599 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 KLHL5Q96PQ7 755 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 YARS2Q9Y2Z4 477 aaKnown RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 SHANK2Q9UPX8 1470 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 STK36Q9NRP7 1315 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 A8MUI8 341 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SLC31A1O15431 190 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ANXA9O76027 345 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 IFNA7P01567 189 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 ZNF14P17017 642 aaPredicted RBP11.13□□□□□ -0.63
MSH6-201ENST00000234420 FAM76BQ5HYJ3 339 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 SATL1Q86VE3 508 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 RASSF1Q9NS23 344 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 KCNH7Q9NS40 1196 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 VPS51Q9UID3 782 aa11.13□□□□□ -0.63
MSH6-201ENST00000234420 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 PDXKO00764 312 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 TRIM9Q9C026 710 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 LRRC40Q9H9A6 602 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 TBC1D30Q9Y2I9 924 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 DAGLAQ9Y4D2 1042 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 DGAT1O75907 488 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 CDK9P50750 372 aaKnown RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 SSTP61278 116 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 SKP1P63208 163 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms