RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PTMAP06454 111 aaKnown RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 ZNF883P0CG24 379 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 LHCGRP22888 699 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 RBL1P28749 1068 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 CD68P34810 354 aaPredicted RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 HNF1BP35680 557 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 EPHB1P54762 984 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 EIF3EP60228 445 aaKnown RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 PFN3P60673 137 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 SLC14A1Q13336 389 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 XRCC4Q13426 336 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 LRRC14Q15048 493 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 ACOX1Q15067 660 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 CNGA3Q16281 694 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 PCSK7Q16549 785 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 MEI1Q5TIA1 1274 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 ZNF662Q6ZS27 426 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 USP45Q70EL2 814 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 HSD11B1LQ7Z5J1 315 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 NAXDQ8IW45 347 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 ZNF567Q8N184 647 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 SETD7Q8WTS6 366 aaKnown RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 HTR3CQ8WXA8 447 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 IMP4Q96G21 291 aaKnown RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 TEKT5Q96M29 485 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 C1QTNF7Q9BXJ2 289 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 SLC25A51Q9H1U9 297 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 KCNF1Q9H3M0 494 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 PCDH9Q9HC56 1237 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 BTBD3Q9Y2F9 522 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 A0A0J9YYE9 177 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 CFAP69A5D8W1 941 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 DFNA5O60443 496 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 SDC3O75056 442 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 TRBC1P01850 177 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 CYP2A6P11509 494 aaPredicted RBP12.71□□□□□ -0.37
LSM5-201ENST00000223084 CSRP1P21291 193 aaKnown RBP12.71□□□□□ -0.37
LSM5-201ENST00000223084 RABIFP47224 123 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 PDE1CQ14123 709 aaPredicted RBP12.71□□□□□ -0.37
LSM5-201ENST00000223084 FZD2Q14332 565 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 GALNT3Q14435 633 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 CRTC1Q6UUV9 634 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 PID1Q7Z2X4 250 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 PELI3Q8N2H9 469 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 PLA2G15Q8NCC3 412 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 COQ10AQ96MF6 247 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 MCCC1Q96RQ3 725 aaPredicted RBP12.71□□□□□ -0.37
LSM5-201ENST00000223084 ERVMER34-1Q9H9K5 563 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 GPR27Q9NS67 375 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 KLHL8Q9P2G9 620 aaPredicted RBP12.71□□□□□ -0.37
LSM5-201ENST00000223084 R3HDM2Q9Y2K5 976 aaKnown RBP12.71□□□□□ -0.37
LSM5-201ENST00000223084 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
LSM5-201ENST00000223084 SPTY2D1-AS1A0A0U1RR47 76 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 SPAARA0A1B0GVQ0 90 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 MED19A0JLT2 244 aaPredicted RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 MTSS1O43312 755 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 PCDHGA12O60330 932 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 PMPCBO75439 489 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 ITGAVP06756 1048 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 RBP3P10745 1247 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 NFKB1P19838 968 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 CA4P22748 312 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 NFKBIAP25963 317 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 ETV3P41162 512 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 RXRGP48443 463 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 INPP5AQ14642 412 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 SUZ12Q15022 739 aaKnown RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 AGERQ15109 404 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 QPCTQ16769 361 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 N4BP2L1Q5TBK1 243 aaPredicted RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 LRRC66Q68CR7 880 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 DARS2Q6PI48 645 aaKnown RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 DBX2Q6ZNG2 339 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 CBARPQ8N350 705 aaPredicted RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 OXR1Q8N573 874 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 FAM174AQ8TBP5 190 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 TADA1Q96BN2 335 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 DNAJC28Q9NX36 388 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 PNMA8BQ9ULN7 279 aaPredicted RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 OR1A2Q9Y585 309 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 PKD1L2Q7Z442 2459 aa12.7□□□□□ -0.38
LSM5-201ENST00000223084 GOLGA4Q13439 2230 aaKnown RBP12.7□□□□□ -0.38
LSM5-201ENST00000223084 GOLGA6L9A6NEM1 432 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 CAPN8A6NHC0 703 aa12.69□□□□□ -0.38
LSM5-201ENST00000223084 K7ESM1 405 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms