RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 VCLP18206 1134 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ARL4DP49703 201 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ADARP55265 1226 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 FAM189BP81408 668 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SHHQ15465 462 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 MS4A13Q5J8X5 152 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SPDYAQ5MJ70 313 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 RHBDF2Q6PJF5 856 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 BNC2Q6ZN30 1099 aaPredicted RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SZRD1Q7Z422 152 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 MRPL43Q8N983 215 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 EBNA1BP2Q99848 306 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 C1QTNF7Q9BXJ2 289 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 EFCAB1Q9HAE3 211 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 CES1P23141 567 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ACVRL1P37023 503 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SLC25A11Q02978 314 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 IL10RBQ08334 325 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ZNF844Q08AG5 666 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 RAET1GQ6H3X3 334 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 IYDQ6PHW0 289 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 LPCAT2Q7L5N7 544 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 IFNEQ86WN2 208 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 EIF1ADQ8N9N8 165 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SNX31Q8N9S9 440 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CERS2Q96G23 380 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 PEBP4Q96S96 227 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SH3GL1Q99961 368 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM120AQ9BXJ8 343 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CAB39Q9Y376 341 aaPredicted RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TUBGCP6Q96RT7 1819 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 RFXAPO00287 272 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 KPNA4O00629 521 aaPredicted RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TM9SF1O15321 606 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 PHGDHO43175 533 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ELFN1P0C7U0 828 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 PSMA4P25789 261 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 PTPN3P26045 913 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 GPR1P46091 355 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ERVK-21P61565 698 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 POU4F1Q01851 419 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 UBE3AQ05086 875 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CTBP1Q13363 440 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 DDX39BQ13838 428 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM240Q5SV17 173 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 FAM171BQ6P995 826 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 POTEHQ6S545 545 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ANKS1BQ7Z6G8 1248 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 C14orf80Q86SX3 495 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TRIM69Q86WT6 500 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CENPTQ96BT3 561 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 MYO19Q96H55 970 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CATSPERZQ9NTU4 200 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 DNAJC16Q9Y2G8 782 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 A0A096LPK6 155 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SAC3D1A6NKF1 404 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 GLRA3O75311 464 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 APOA4P06727 396 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TYRP14679 529 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 DDX6P26196 483 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 GDF10P55107 478 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SLC10A7Q0GE19 358 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 EIF2B5Q13144 721 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TCEAL8Q8IYN2 117 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ACDQ96AP0 544 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 PGM2Q96G03 612 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SLC25A51Q9H1U9 297 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SFXN1Q9H9B4 322 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SAR1AQ9NR31 198 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 FBXO6Q9NRD1 293 aaPredicted RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 MYH10P35580 1976 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 RGPD3A6NKT7 1758 aaPredicted RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 RGPD4Q7Z3J3 1758 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TNFAIP8O95379 198 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 NDST3O95803 873 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 RAB14P61106 215 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 SEMG2Q02383 582 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 DCTN2Q13561 401 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 KRT72Q14CN4 511 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TNIP2Q8NFZ5 429 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 ZFYVE19Q96K21 471 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 TEKT5Q96M29 485 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 STN1Q9H668 368 aaKnown RBP9.44□□□□□ -0.9
CCDC113-201ENST00000219299 HCFC2Q9Y5Z7 792 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 CASP8AP2Q9UKL3 1982 aa9.44□□□□□ -0.9
CCDC113-201ENST00000219299 PRPF4O43172 522 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC113-201ENST00000219299 H2AFYO75367 372 aaKnown RBP9.43□□□□□ -0.9
CCDC113-201ENST00000219299 WASHC5Q12768 1159 aa9.43□□□□□ -0.9
CCDC113-201ENST00000219299 PDGFRLQ15198 375 aa9.43□□□□□ -0.9
CCDC113-201ENST00000219299 PTPRNQ16849 979 aa9.43□□□□□ -0.9
CCDC113-201ENST00000219299 MBLAC2Q68D91 279 aa9.43□□□□□ -0.9
CCDC113-201ENST00000219299 ARMC6Q6NXE6 501 aa9.43□□□□□ -0.9
CCDC113-201ENST00000219299 BBS7Q8IWZ6 715 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms