RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ptk7Q8BKG3 1062 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 4932414N04RikQ8CEQ9 752 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dennd2dQ91VV4 469 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 GneQ91WG8 722 aaKnown RBP12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pcdhgc3Q91XX1 934 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sytl2Q99N50 950 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 GMCL1P1Q99N64 498 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Lrrc40Q9CRC8 602 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ttc25Q9D4B2 624 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Nt5cQ9JM14 200 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyhr1Q9QXA1 311 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 St6galnac1Q9QZ39 526 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cdc42ep5Q9Z0X0 150 aa12.96□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zfp985A2A7A5 519 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 SmoktcrA2KF29 484 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Gm8257E9Q8R3 264 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 F830016B08RikG3UWE2 416 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Grip2G3XA20 1042 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Gp5O08742 567 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Tpst2O88856 376 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Man1a1P45700 655 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Impdh1P50096 514 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Serpinb5P70124 375 aaKnown RBP12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 OxtrP97926 388 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Rsrp1Q3UC65 298 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Mocs1Q5RKZ7 636 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Msi1Q61474 362 aaKnown RBP12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 PtprrQ62132 656 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 RbfaQ6P3B9 350 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Maml1Q6T264 1020 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Lrfn2Q80TG9 788 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Rpp38Q80UU2 280 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Kirrel1Q80W68 789 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Hsfy2Q80Y37 392 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Mtrf1lQ8BJU9 373 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Castor2Q8CAB8 329 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Snx8Q8CFD4 459 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Slc47a1Q8K0H1 567 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Dclre1cQ8K4J0 705 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Adgrg3Q8R0T6 542 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Ggt7Q99JP7 662 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 DhddsQ99KU1 333 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Gmpr2Q99L27 348 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Oxct1Q9D0K2 520 aaKnown RBP12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Pik3cgQ9JHG7 1102 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 CtsmQ9JL96 333 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 H2afb2S4R1M3 115 aa12.96□□□□□ -0.34
Nup88-203ENSMUST00000108531 Olfr839-ps1A0A1D5RMH6 312 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Klk1b8P07628 261 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Prf1P10820 554 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 TubP50586 505 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Cdh9P70407 786 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Sdr16c6Q05A13 316 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Nol9Q3TZX8 714 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Tmed1Q3V009 227 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 MogQ61885 246 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Lingo3Q6GQU6 589 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Otud6aQ6IE21 290 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Rtl3Q6P1Y1 553 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Stmnd1Q6P3A1 279 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Tmem252Q8C353 183 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Slc35e2Q8C811 405 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Usp45Q8K387 813 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Unc93b1Q8VCW4 598 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Retreg3Q9CQV4 466 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Hddc3Q9D114 179 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Tnfsf13Q9D777 241 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Mmp19Q9JHI0 527 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Scamp5Q9JKD3 235 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Aqp5Q9WTY4 265 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 PtprfA2A8L5 1898 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Ccdc194A0A140LIT1 234 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Rnf19bA2A7Q9 732 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Nfx1B1AY10 1114 aaKnown RBP12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 4930558K02RikE0CXC6 182 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 BrafP28028 804 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Tuba4aP68368 448 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Trappc9Q3U0M1 1148 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Slfn4Q3UV66 602 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Vps51Q3UVL4 782 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Trpv3Q8K424 791 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 FktnQ8R507 461 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Adam33Q923W9 797 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Itfg1Q99KW9 610 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Kif19Q99PT9 997 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Unc50Q9CQ61 259 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 VasnQ9CZT5 673 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Prpsap1Q9D0M1 356 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Armc1Q9D7A8 282 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 D7h11orf16Q9JJR6 402 aa12.95□□□□□ -0.34
Nup88-203ENSMUST00000108531 Zscan4eA0A1B0GRE8 505 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Gm3526E9PZM0 191 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 1600015I10RikE9Q745 711 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Vmn2r57L7N269 863 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Rundc3aO08576 446 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Atn1O35126 1175 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Socs2O35717 198 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Limk2O54785 638 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Defa8P50706 81 aa12.94□□□□□ -0.34
Nup88-203ENSMUST00000108531 Tespa1Q3U132 458 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms