RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Slc39a3Q99K24 317 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ifrd2Q9D8U0 441 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Arap3Q8R5G7 1538 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pnpla6Q3TRM4 1355 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm2888K7N746 267 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 MutP16332 748 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Atoh1P48985 351 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Trpv5P69744 723 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Trappc9Q3U0M1 1148 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 A630001G21RikQ3UTB2 229 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc39a4Q78IQ7 660 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Q8BL95 290 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Clic5Q8BXK9 251 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cst11Q9D269 139 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Abca14E9Q8F8 1683 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zscan5bB2RTN3 468 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Akr1clQ3UXL1 322 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mrm3Q5ND52 418 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gba2Q69ZF3 918 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Vmn2r50E9PW61 861 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm8050L7N2E3 205 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hoxb6P09023 224 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fam83hQ148V8 1209 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 ProcrQ64695 242 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Q6GQV0 436 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr389Q7TRX7 312 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm28363A0A087WQW2 129 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm28048F7BCN0 99 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 PenkP22005 268 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 KapP61110 121 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Prickle1Q3U5C7 832 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr393Q8VGR6 312 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Clca3bE9PUL3 1044 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hoxa2P31245 372 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 HnrnpdQ60668 355 aaKnown RBP16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rbl1Q64701 1063 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc22a19Q8VCA0 551 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Usp26Q99MX1 835 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hectd2Q8CDU6 774 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 CarfQ8VHI4 689 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Il27raO70394 623 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Acsbg2Q2XU92 667 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm813Q3UWK9 176 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dnph1Q80VJ3 173 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rex1bdQ9CYZ6 169 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Med8Q9D7W5 268 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Plod3Q9R0E1 741 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm6337K7N6X9 211 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm3115L7N285 211 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pnpla5Q32LZ8 432 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 BC061212Q6P8K3 481 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tcaf3Q6QR59 914 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dusp4Q8BFV3 398 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mup13L7N222 235 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 LdhcP00342 332 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 TnfP06804 235 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Adam39Q7M762 756 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pcdha1Q91Y21 948 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm5114W4VSN8 858 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zfp985A2A7A5 519 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Polr1cP52432 346 aaKnown RBP16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pros1Q08761 675 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc16a10Q3U9N9 512 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tapt1Q4VBD2 564 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Six2Q62232 296 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Med22Q62276 200 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Serpina3aQ6P4P1 422 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Clcc1Q99LI2 539 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 TagapB2RWW0 714 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Vps45P97390 570 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ddx52Q8K301 598 aaKnown RBP16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Epn3Q91W69 636 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 TfebQ9R210 475 aa16.62■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tbc1d16A2ABG4 766 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Vmn2r67K7N6T2 851 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Syt4P40749 425 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 PitpnaP53810 271 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zyg11bQ3UFS0 744 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gprc5cQ8K3J9 440 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rsph14Q9D3W1 341 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ehd1Q9WVK4 534 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zfp563B8JJZ9 448 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 IntS13Q8QZV7 732 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tceal3Q8R0A5 200 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rpp40Q8R1F9 363 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 HnrnpabQ99020 285 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pla2g12bQ99P27 195 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm13089A2AGW7 455 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Serpinb9eO08806 377 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Nfatc2ipO09130 412 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Azin1O35484 448 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Il33Q8BVZ5 266 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 GarsQ9CZD3 729 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fbxo16Q9QZM9 334 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm20509G3UZF1 325 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ndst1Q3UHN9 882 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Znrf3Q5SSZ7 913 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rasa4Q6PFQ7 802 aa16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dlg1Q811D0 905 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Exoc3l1Q8BI71 739 aa16.61■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms