RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 MkksQ9JI70 570 aa10.71□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Mpp6Q9JLB0 553 aa10.71□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Ehd1Q9WVK4 534 aaKnown RBP10.71□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Itgb4A2A863 1818 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ecm29Q6PDI5 1840 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Arid1aA2BH40 2283 aaKnown RBP10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gucy2dA0A0U1RPR8 1117 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gm17615E9Q9P2 165 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 SpnP15702 395 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Igfbp4P47879 254 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ppm1aP49443 382 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 ArsaP50428 506 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Emilin3P59900 758 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Vbp1P61759 196 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Rnf157Q3TEL6 685 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 InipQ3TXT3 104 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Slc22a16Q497L8 649 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gm2163Q6PCY5 473 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Q810S2 196 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Casp9Q8C3Q9 454 aa10.71□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gm6509A0A0J9YUV1 481 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Sh3pxd2bA2AAY5 908 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Zfp563B8JJZ9 448 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ifi213D3Z5G0 586 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Tsc22d2E9Q7M2 769 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Vmn2r70K7N702 854 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gm6351K9J7D1 481 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Rab12P35283 243 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 LdlrP35951 862 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Mfsd14aP70187 490 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Tff2Q03404 129 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Siah1bQ06985 282 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Afg1lQ3V384 480 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Rps9Q6ZWN5 194 aaKnown RBP10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Clec18aQ7TSQ1 534 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Suz12Q80U70 741 aaKnown RBP10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Wscd1Q80XH4 572 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 4931406P16RikQ8C5X1 1059 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Rnf8Q8VC56 488 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Mob2Q8VI63 235 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Q9CPZ3 230 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Tsga13Q9DA17 273 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gmeb1Q9JL60 562 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Aldoart1A6ZI46 419 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Il4i1O09046 630 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 GlrbP48168 496 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 SgcdP82347 289 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Frg1P97376 258 aaKnown RBP10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Col28a1Q2UY11 1141 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Rcsd1Q3UZA1 412 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Olfr464Q5SW48 313 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 MelkQ61846 643 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Nfe2l1Q61985 741 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ints7Q7TQK1 966 aaKnown RBP10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 D3Ertd751eQ8BGN2 192 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Mamdc2Q8CG85 686 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Swi5Q8K3D3 89 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 DaglbQ91WC9 669 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Dlg2Q91XM9 852 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Pcdha1Q91Y21 948 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Themis3Q9CU24 569 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Taf1dQ9D4V4 322 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Nmnat1Q9EPA7 285 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Plscr1Q9JJ00 328 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Trpc2Q9R244 1172 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Psme4Q5SSW2 1843 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 A0A286YDU1 74 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ccdc163A2AGD7 326 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ptpn3A2ALK8 913 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 PiggD3Z3Y1 983 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 XntrpcF8VQM8 1264 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 TP20293 436 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 OstnP61364 130 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Zfp953Q3UPV7 304 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Oog3Q3UWY1 500 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ddx55Q6ZPL9 600 aaKnown RBP10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Fzd10Q8BKG4 582 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Adgrg7Q8BM96 785 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Castor2Q8CAB8 329 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Cox18Q8VC74 331 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Lman1lQ8VCD3 505 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Uxs1Q91XL3 420 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Prpf19Q99KP6 504 aaKnown RBP10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Cxxc1Q9CWW7 660 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Tex19.2Q9D5S1 317 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Arih2Q9Z1K6 492 aa10.7□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Vmn2r59E9PUT5 865 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Klrk1O54709 232 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Cd70O55237 195 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 PolP11369 1281 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 St3gal1P54751 337 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Fmo5P97872 533 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gsdmc2Q2KHK6 480 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Med22Q62276 200 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 RetsatQ64FW2 609 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Cyp2c54Q6XVG2 490 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Hsfy2Q80Y37 392 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Gpr150Q8BL07 427 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Ipo11Q8K2V6 975 aa10.69□□□□□ -0.7
Rnf40-201ENSMUST00000033088 Slc8a2Q8K596 921 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms