RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rnf135Q9CWS1 417 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tjp3Q9QXY1 905 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm5565A0A0G2JGB2 317 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ppm1bP36993 390 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 TrhdeQ8K093 1025 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gon4lQ9DB00 2260 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm4131A0A140LJ24 318 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 A0A286YDU1 74 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rad51dO55230 329 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 6430531B16RikQ3V2J1 307 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mgat5bQ765H6 792 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fam83eQ80XS7 481 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 NanogQ80Z64 305 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fbxl21Q8BFZ4 434 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gstm4Q8R5I6 218 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rex1bdQ9CYZ6 169 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Etnk1Q9D4V0 363 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 GhrlQ9EQX0 117 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 HemgnQ9ERZ0 503 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Zbtb32Q9JKD9 465 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cd97Q9Z0M6 818 aa13.99□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fosl1P48755 273 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cyp2c39P56656 490 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Xkr9Q5GH62 373 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Q6GQV0 436 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Kcnq3Q8K3F6 873 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 5530400C23RikQ9D3I0 173 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm28363A0A087WQW2 129 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 TagapB2RWW0 714 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Glud1P26443 558 aaKnown RBP13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Atxn1P54254 791 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rps12P63323 132 aaKnown RBP13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rgs14P97492 547 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tmem59lQ7TNI2 337 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Slc41a1Q8BJA2 512 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ints5Q8CHT3 1018 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 HnrnpabQ99020 285 aaKnown RBP13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Abca17E9PX95 1733 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fam166bA2AIP0 273 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PpigA2AR02 752 aaKnown RBP13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Itga8A2ARA8 1062 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Zfp28P10078 825 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PoliQ6R3M4 717 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cxxc5Q91WA4 317 aaKnown RBP13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Arhgap36B1AUC7 590 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lgals7O54974 136 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Klrb1aP27811 227 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 TdgP56581 421 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gxylt2Q810K9 444 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Memo1Q91VH6 297 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Vta1Q9CR26 309 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Elp3Q9CZX0 547 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 AadatQ9WVM8 425 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 IapP03975 557 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 NkaplQ5SZT7 395 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Bcar1Q61140 874 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Dpy19l3Q71B07 716 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Olfr808Q8VGI8 312 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pskh1Q91YA2 424 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Trpv4Q9EPK8 871 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 AglF8VPN4 1532 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pdss1Q33DR2 409 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rin2Q9D684 903 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 CluhQ5SW19 1315 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ssxb9A2BI93 185 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ntf3P20181 258 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Epb42P49222 691 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 UqcrhP99028 89 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mrgprx2Q3UG50 352 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ankrd13bQ5F259 626 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ca4Q64444 305 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Elmo1Q8BPU7 727 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Elmo3Q8BYZ7 720 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Vwa1Q8R2Z5 415 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Chil4Q91Z98 402 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Kctd4Q9D7X1 259 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ing5Q9D8Y8 240 aa13.98□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Hoxc6P10629 235 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ephb3P54754 993 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ptcd3Q14C51 685 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Chtf18Q8BIW9 969 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ints10Q8K2A7 710 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Klhl36Q8R124 613 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PignQ9R1S3 931 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Dip2bQ3UH60 1574 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 2210011C24RikA0A087WQ89 206 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Frmd5Q6P5H6 517 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Nipal1Q8BMW7 416 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mrpl9Q99N94 265 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pin4Q9CWW6 131 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Hddc3Q9D114 179 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cables1Q9ESJ1 568 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Vmn2r73D3Z7M3 851 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cap1P40124 474 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mmp14P53690 582 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Eif5aP63242 154 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ppm1mQ8BU27 406 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lamtor4Q8CF66 99 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lrp8Q924X6 996 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 EbplQ9D0P0 206 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms