RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Rbck1Q9WUB0 508 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Cd320Q9Z1P5 260 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Gm28043E0CXC2 719 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Dpysl2O08553 572 aaKnown RBP20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Mcpt1P11034 246 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Crabp2P22935 138 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Kir3dl1P83555 432 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Pdcd1Q02242 288 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Fbxw2Q60584 422 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 MroQ7TNB4 248 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Creb5Q8K1L0 357 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Pglyrp2Q8VCS0 530 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Ccdc92Q8VDN4 314 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Sult5a1Q91X36 291 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 AjubaQ91XC0 547 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Mtfr1Q99MB2 328 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Mrps17Q9CQE3 120 aaKnown RBP20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Marc1Q9CW42 340 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Rpl34Q9D1R9 117 aaKnown RBP20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 Fndc8Q9D2H8 321 aa20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 QkiQ9QYS9 341 aaKnown RBP20.47■□□□□ 0.87
Trim47-201ENSMUST00000021120 A630010A05RikA9C473 232 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Vmn2r27D3YUK6 857 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Cldn24D3YXJ9 220 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Gm3239L7N2D9 227 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Foxm1O08696 760 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Dpy19l2P0CW70 773 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Plk2P53351 682 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Cdh5P55284 784 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 CcnhQ61458 323 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Stx16Q8BVI5 326 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Slc36a1Q8K4D3 475 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Dedd2Q8QZV0 330 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Prpf19Q99KP6 504 aaKnown RBP20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 MmadhcQ99LS1 296 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Tsga13Q9DA17 273 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Atf6F6VAN0 656 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 MutP16332 748 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 InhbcP55104 352 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Fnip2Q80TD3 1108 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Tbc1d17Q8BYH7 645 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Arhgap25Q8BYW1 648 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Pde10aQ8CA95 790 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 NaprtQ8CC86 538 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Clip4Q8CI96 704 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Pcdhb10Q91VE5 797 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Vangl2Q91ZD4 521 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Tex19.1Q99MV2 351 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Tmem115Q9WUH1 350 aa20.46■□□□□ 0.87
Trim47-201ENSMUST00000021120 Olfr292F8VQ84 308 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Akain1G3UWD5 69 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 AvilO88398 819 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Jak1P52332 1153 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 HpcaP84075 193 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Pwwp2aQ69Z61 730 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Olfr798Q7TRH8 311 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Olfr20Q7TRX9 314 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gramd1bQ80TI0 738 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gpr62Q80UC6 358 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Trit1Q80UN9 467 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Fzd10Q8BKG4 582 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ston2Q8BZ60 895 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Cacnb2Q8CC27 655 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Otud7aQ8R554 926 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Dlg2Q91XM9 852 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Pcdhb18Q91Y02 792 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ephx1Q9D379 455 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gpr45Q9EQQ4 373 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 9230113P08RikD3YWX3 137 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm5145F8VQ88 278 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Rad51ap2G3UW63 976 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 PpargP37238 505 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Sipa1P46062 1037 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Atp6v1b2P62814 511 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Sycp3P70281 254 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ceacam5Q3UKK2 947 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 E330034G19RikQ3UWX6 351 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Dpy19l3Q71B07 716 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Lyve1Q8BHC0 318 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Slc17a6Q8BLE7 582 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Tmtc3Q8BRH0 920 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Plin5Q8BVZ1 463 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Atpaf2Q91YY4 289 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Ndufb5Q9CQH3 189 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Vps28Q9D1C8 221 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Clic3Q9D7P7 237 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Spag6Q9JLI7 507 aa20.45■□□□□ 0.86
Trim47-201ENSMUST00000021120 Phf11A6H5X4 337 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Serpina3iD3Z450 408 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 ShdO88834 343 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gm5571P01639 130 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Fen1P39749 378 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Lhx3P50481 400 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 TubP50586 505 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 UtyP79457 1212 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Vps45P97390 570 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gcnt3Q5JCT0 437 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Mylk4Q5SUV5 386 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Olfr792Q7TRH9 311 aa20.44■□□□□ 0.86
Trim47-201ENSMUST00000021120 Gspt1Q8R050 636 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms