RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Pmf1Q9CPV5 202 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pbld2Q9CXN7 288 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hormad1Q9D5T7 392 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rnft1Q9DCN7 395 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cldn19Q9ET38 224 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Fbxo17Q9QZM8 286 aa16.27■□□□□ 0.2
Trim28-201ENSMUST00000005705 Acnat1A2AKK5 416 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Phf11bB4XVQ1 276 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 CrymO54983 313 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Epb41P48193 858 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Apobec1P51908 229 aaKnown RBP16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lrig1P70193 1091 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Hrh2P97292 397 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Itga4Q00651 1039 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Krt80Q0VBK2 452 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mtrf1lQ8BJU9 373 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 LnpepQ8C129 1025 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Q8CCC3 530 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ifi205aQ8CGE8 404 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fubp1Q91WJ8 651 aaKnown RBP16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Golm1Q91XA2 393 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 MydgfQ9CPT4 166 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 PlgrktQ9D3P8 147 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slfn2Q9Z0I6 378 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pex11bQ9Z210 259 aa16.27■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tpst1O70281 370 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ap1g1P22892 822 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Arl1P61211 181 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 OxtrP97926 388 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Aqp1Q02013 269 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Usp22Q5DU02 525 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gba2Q69ZF3 918 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tmem151aQ6GQT5 468 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Naa50Q6PGB6 169 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tas2r129Q7M709 320 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr1062Q7TR71 315 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Arhgap11aQ80Y19 987 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tlk1Q8C0V0 766 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fam78aQ8C552 283 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gbp5Q8CFB4 590 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 HnrnpllQ921F4 591 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Q922R1 422 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fbxl20Q9CZV8 436 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Hacd2Q9D3B1 254 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Syap1Q9D5V6 365 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Spag4Q9JJF2 443 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr839-ps1A0A1D5RMH6 312 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Zfp963D3Z2T8 383 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Sec22bO08547 215 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 P01650 108 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 P01653 108 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 P01740 135 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lcp1Q61233 627 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lrrc8eQ66JT1 795 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Casc4Q6P2L7 435 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tdpoz3Q717B4 365 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr295Q7TS08 309 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gtf2a2Q80ZM7 109 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cxcr1Q810W6 351 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Vps26bQ8C0E2 336 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nox1Q8CIZ9 591 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ddx18Q8K363 660 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ace2Q8R0I0 805 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Retreg3Q9CQV4 466 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Zdbf2Q5SS00 2493 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Thsd7bQ6P4U0 1607 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm6509A0A0J9YUV1 481 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slc4a5E9Q3M5 1116 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm6351K9J7D1 481 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm3739L7N296 216 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 CcnoP0C242 352 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Svs4P18419 113 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Irs1P35569 1233 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 EsrrgP62509 458 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 BmxP97504 651 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 AxlQ00993 888 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Larp7Q05CL8 570 aaKnown RBP16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nat9Q3UG98 241 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm5800Q497L3 186 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tex24Q5DP50 351 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rtl3Q6P1Y1 553 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 InavaQ7TN12 663 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr20Q7TRX9 314 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dnajb13Q80Y75 316 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mfn1Q811U4 741 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Zfp438Q8BFX2 798 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nmur2Q8BZ39 395 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 TpbglQ8C013 384 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Sfrp1Q8C4U3 314 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 RtknQ8C6B2 564 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tada2aQ8CHV6 443 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ogfod2Q9CQ04 349 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Q9CR55 154 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Upk1aQ9D132 257 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Kdelc1Q9JHP7 502 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rgs1Q9JL25 209 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 CtsjQ9R014 334 aa16.26■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cyp2b23E9Q593 491 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cyp27b1O35084 507 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 MutP16332 748 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms