RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	BRI3BP	Q8WY22	251 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	CASP10	Q92851	521 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	ALG9	Q9H6U8	611 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	OLAH	Q9NV23	265 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	RNF181	Q9P0P0	153 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	TMEM181	Q9P2C4	612 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	GIMAP2	Q9UG22	337 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	MOCS2	O96007	188 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	ALDOC	P09972	364 aa	Known RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	PAM	P19021	973 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	CDH2	P19022	906 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	BRCC3	P46736	316 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	LEPR	P48357	1165 aa	Known RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	SLC7A2	P52569	658 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	CDKN2D	P55273	166 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	NME5	P56597	212 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	GPR158	Q5T848	1215 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	HECTD2	Q5U5R9	776 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	PIM3	Q86V86	326 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	TSPAN14	Q8NG11	270 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	HASPIN	Q8TF76	798 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	IRGQ	Q8WZA9	623 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	DTNBP1	Q96EV8	351 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	RANBP9	Q96S59	729 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	FAM105A	Q9NUU6	356 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	FLRT1	Q9NZU1	646 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	PTGDR2	Q9Y5Y4	395 aa		13.89	□□□□□ -0.19
PHGDH-233	ENST00000642021	CCL15-CCL14	A0A0B4J2E2	113 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	OR51F1	A6NGY5	319 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	ARL5C	A6NH57	179 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	ZNF839	A8K0R7	811 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	HNRNPR	O43390	633 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	SUPT7L	O94864	414 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	SLC7A1	P30825	629 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	HOXC13	P31276	330 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	ARSD	P51689	593 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	USP46	P62068	366 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CCL15	Q16663	113 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	LRRC23	Q53EV4	343 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	FAM171B	Q6P995	826 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	KDELC1	Q6UW63	502 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	DDI1	Q8WTU0	396 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CANT1	Q8WVQ1	401 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	TMEM79	Q9BSE2	394 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	NOL6	Q9H6R4	1146 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CAAP1	Q9H8G2	361 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	LIN28A	Q9H9Z2	209 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	EML4	Q9HC35	981 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CROT	Q9UKG9	612 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	PHF24	Q9UPV7	400 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021		C9JVG2	144 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	PEX11B	O96011	259 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	PSMD5	Q16401	504 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	PLEKHH3	Q7Z736	793 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	ISCA2	Q86U28	154 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	OR10T2	Q8NGX3	314 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	KLHL5	Q96PQ7	755 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	PHF12	Q96QT6	1004 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	IL1RL2	Q9HB29	575 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	DUS2	Q9NX74	493 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	IPO11	Q9UI26	975 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CNOT6	Q9ULM6	557 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	ST3GAL5	Q9UNP4	418 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	VWA7	Q9Y334	891 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	KCTD3	Q9Y597	815 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	BRCA2	P51587	3418 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	SOCS2	O14508	198 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CDK4	P11802	303 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	KPNA2	P52292	529 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	TRAP1	Q12931	704 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	ACAP2	Q15057	778 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	UPP1	Q16831	310 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	UGT3A2	Q3SY77	523 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	AGMO	Q6ZNB7	445 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	FAM81A	Q8TBF8	368 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	TOP1MT	Q969P6	601 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	FAR2	Q96K12	515 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	UHRF1	Q96T88	793 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	CCT7	Q99832	543 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	SLC25A23	Q9BV35	468 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	TMEM165	Q9HC07	324 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	PREB	Q9HCU5	417 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	SLC38A7	Q9NVC3	462 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	MAP10	Q9P2G4	905 aa		13.88	□□□□□ -0.19
PHGDH-233	ENST00000642021	TTC3	P53804	2025 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	C17orf102	A2RUQ5	167 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	LRRC14B	A6NHZ5	514 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021		J3KR12	359 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	HTRA2	O43464	458 aa	Predicted RBP	13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	H6PD	O95479	791 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	PENK	P01210	267 aa	Predicted RBP	13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	RBP1	P09455	135 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	UGT1A6	P19224	532 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	IMPDH1	P20839	514 aa		13.87	□□□□□ -0.19
PHGDH-233	ENST00000642021	ATP6V1B2	P21281	511 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms